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GAB3 (GRB2 associated binding protein 3)

Identity

Other alias-
HGNC (Hugo) GAB3
LocusID (NCBI) 139716
Atlas_Id 63641
Location Xq28  [Link to chromosome band Xq28]
Location_base_pair Starts at 154675250 and ends at 154751083 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GIGYF2 (2q37.1) / GAB3 (Xq28)IKBKG (Xq28) / GAB3 (Xq28)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GAB3   17515
Cards
Entrez_Gene (NCBI)GAB3  139716  GRB2 associated binding protein 3
Aliases
GeneCards (Weizmann)GAB3
Ensembl hg19 (Hinxton)ENSG00000160219 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000160219 [Gene_View]  chrX:154675250-154751083 [Contig_View]  GAB3 [Vega]
ICGC DataPortalENSG00000160219
TCGA cBioPortalGAB3
AceView (NCBI)GAB3
Genatlas (Paris)GAB3
WikiGenes139716
SOURCE (Princeton)GAB3
Genetics Home Reference (NIH)GAB3
Genomic and cartography
GoldenPath hg38 (UCSC)GAB3  -     chrX:154675250-154751083 -  Xq28   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GAB3  -     Xq28   [Description]    (hg19-Feb_2009)
EnsemblGAB3 - Xq28 [CytoView hg19]  GAB3 - Xq28 [CytoView hg38]
Mapping of homologs : NCBIGAB3 [Mapview hg19]  GAB3 [Mapview hg38]
OMIM300482   
Gene and transcription
Genbank (Entrez)AA808085 AI799102 AK126283 AK307927 AL832051
RefSeq transcript (Entrez)NM_001081573 NM_001282283 NM_080612
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GAB3
Cluster EST : UnigeneHs.496982 [ NCBI ]
CGAP (NCI)Hs.496982
Alternative Splicing GalleryENSG00000160219
Gene ExpressionGAB3 [ NCBI-GEO ]   GAB3 [ EBI - ARRAY_EXPRESS ]   GAB3 [ SEEK ]   GAB3 [ MEM ]
Gene Expression Viewer (FireBrowse)GAB3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)139716
GTEX Portal (Tissue expression)GAB3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WWW8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WWW8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WWW8
Splice isoforms : SwissVarQ8WWW8
PhosPhoSitePlusQ8WWW8
Domaine pattern : Prosite (Expaxy)PH_DOMAIN (PS50003)   
Domains : Interpro (EBI)PH_dom-like    PH_domain   
Domain families : Pfam (Sanger)PH (PF00169)   
Domain families : Pfam (NCBI)pfam00169   
Domain families : Smart (EMBL)PH (SM00233)  
Conserved Domain (NCBI)GAB3
DMDM Disease mutations139716
Blocks (Seattle)GAB3
SuperfamilyQ8WWW8
Human Protein AtlasENSG00000160219
Peptide AtlasQ8WWW8
HPRD06571
IPIIPI00103456   IPI00644774   IPI00853013   IPI00940991   
Protein Interaction databases
DIP (DOE-UCLA)Q8WWW8
IntAct (EBI)Q8WWW8
FunCoupENSG00000160219
BioGRIDGAB3
STRING (EMBL)GAB3
ZODIACGAB3
Ontologies - Pathways
QuickGOQ8WWW8
Ontology : AmiGOmacrophage differentiation  
Ontology : EGO-EBImacrophage differentiation  
NDEx NetworkGAB3
Atlas of Cancer Signalling NetworkGAB3
Wikipedia pathwaysGAB3
Orthology - Evolution
OrthoDB139716
GeneTree (enSembl)ENSG00000160219
Phylogenetic Trees/Animal Genes : TreeFamGAB3
HOVERGENQ8WWW8
HOGENOMQ8WWW8
Homologs : HomoloGeneGAB3
Homology/Alignments : Family Browser (UCSC)GAB3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGAB3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GAB3
dbVarGAB3
ClinVarGAB3
1000_GenomesGAB3 
Exome Variant ServerGAB3
ExAC (Exome Aggregation Consortium)GAB3 (select the gene name)
Genetic variants : HAPMAP139716
Genomic Variants (DGV)GAB3 [DGVbeta]
DECIPHERGAB3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGAB3 
Mutations
ICGC Data PortalGAB3 
TCGA Data PortalGAB3 
Broad Tumor PortalGAB3
OASIS PortalGAB3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGAB3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGAB3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch GAB3
DgiDB (Drug Gene Interaction Database)GAB3
DoCM (Curated mutations)GAB3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GAB3 (select a term)
intoGenGAB3
Cancer3DGAB3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300482   
Orphanet
MedgenGAB3
Genetic Testing Registry GAB3
NextProtQ8WWW8 [Medical]
TSGene139716
GENETestsGAB3
Target ValidationGAB3
Huge Navigator GAB3 [HugePedia]
snp3D : Map Gene to Disease139716
BioCentury BCIQGAB3
ClinGenGAB3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD139716
Chemical/Pharm GKB GenePA28479
Clinical trialGAB3
Miscellaneous
canSAR (ICR)GAB3 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGAB3
EVEXGAB3
GoPubMedGAB3
iHOPGAB3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:50:06 CEST 2017

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