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GABPB1-IT1 (GABPB1 intronic transcript)

Identity

Alias_symbol (synonym)FLJ10038
Other alias-
HGNC (Hugo) GABPB1-IT1
LocusID (NCBI) 55056
Atlas_Id 78946
Location 15q21.2  [Link to chromosome band 15q21]
Location_base_pair Starts at 50353401 and ends at 50354861 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)GABPB1-IT1   25469
Cards
Entrez_Gene (NCBI)GABPB1-IT1  55056  GABPB1 intronic transcript
Aliases
GeneCards (Weizmann)GABPB1-IT1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:50353401-50354861 [Contig_View]  GABPB1-IT1 [Vega]
TCGA cBioPortalGABPB1-IT1
AceView (NCBI)GABPB1-IT1
Genatlas (Paris)GABPB1-IT1
WikiGenes55056
SOURCE (Princeton)GABPB1-IT1
Genetics Home Reference (NIH)GABPB1-IT1
Genomic and cartography
GoldenPath hg38 (UCSC)GABPB1-IT1  -     chr15:50353401-50354861 -  15q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GABPB1-IT1  -     15q21.2   [Description]    (hg19-Feb_2009)
EnsemblGABPB1-IT1 - 15q21.2 [CytoView hg19]  GABPB1-IT1 - 15q21.2 [CytoView hg38]
Mapping of homologs : NCBIGABPB1-IT1 [Mapview hg19]  GABPB1-IT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK000900 BC009935 BC068063
RefSeq transcript (Entrez)NM_017976
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GABPB1-IT1
Cluster EST : UnigeneHs.511316 [ NCBI ]
CGAP (NCI)Hs.511316
Gene ExpressionGABPB1-IT1 [ NCBI-GEO ]   GABPB1-IT1 [ EBI - ARRAY_EXPRESS ]   GABPB1-IT1 [ SEEK ]   GABPB1-IT1 [ MEM ]
Gene Expression Viewer (FireBrowse)GABPB1-IT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)55056
GTEX Portal (Tissue expression)GABPB1-IT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GABPB1-IT1
DMDM Disease mutations55056
Blocks (Seattle)GABPB1-IT1
Protein Interaction databases
BioGRIDGABPB1-IT1
STRING (EMBL)GABPB1-IT1
ZODIACGABPB1-IT1
Ontologies - Pathways
Huge Navigator GABPB1-IT1 [HugePedia]
snp3D : Map Gene to Disease55056
BioCentury BCIQGABPB1-IT1
ClinGenGABPB1-IT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55056
Clinical trialGABPB1-IT1
Miscellaneous
canSAR (ICR)GABPB1-IT1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGABPB1-IT1
EVEXGABPB1-IT1
GoPubMedGABPB1-IT1
iHOPGABPB1-IT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:09:03 CEST 2017

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