Atlas of Genetics and Cytogenetics in Oncology and Haematology

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GAGE1 (G antigen 1)

Identity

Other namesCT4.1
GAGE-1
HGNC (Hugo) GAGE1
LocusID (NCBI) 2543
Location Xp11.23
Location_base_pair Starts at 49363616 and ends at 49373139 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)GAGE1   4098
Entrez_Gene (NCBI)GAGE1  2543  G antigen 1
Cards
GeneCards (Weizmann)GAGE1
Ensembl (Hinxton)ENSG00000205777 [Gene_View]  chrX:49363616-49373139 [Contig_View]  GAGE1 [Vega]
AceView (NCBI)GAGE1
Genatlas (Paris)GAGE1
SOURCE (Stanford)NM_001040663 NM_001468
Genomic and cartography
GoldenPath (UCSC)GAGE1  -  Xp11.23   chrX:49363616-49373139 +  Xp11.23   [Description]    (hg19-Feb_2009)
EnsemblGAGE1 - Xp11.23 [CytoView]
Mapping of homologs : NCBIGAGE1 [Mapview]
OMIM300594   
Gene and transcription
Genbank (Entrez)BC005363 BC036094 BC069470 DB448801 DQ890959
RefSeq transcript (SRS)NM_001040663 NM_001468
RefSeq transcript (Entrez)NM_001040663 NM_001468
RefSeq genomic (SRS)AC_000155 NC_000023 NC_018934 NT_086939 NW_001842364 NW_004070880 NW_004078120
RefSeq genomic (Entrez)AC_000155 NC_000023 NC_018934 NT_086939 NW_001842364 NW_004070880 NW_004078120
Consensus coding sequences : CCDS (NCBI)GAGE1
Cluster EST : UnigeneHs.278606 [ SRS ] Hs.278606 [ NCBI ]
CGAP (NCI)Hs.278606
Alternative Splicing : Fast-db (Paris)GSHG0034060
Alternative Splicing GalleryENSG00000205777
Gene ExpressionGAGE1 [ NCBI-GEO ]   GAGE1 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ13065 (SRS) Q13065 (Uniprot)
NextProtQ13065
With graphics : InterProQ13065
Splice isoforms : SwissVarQ13065(Swissvar)
Domains : Interpro (SRS)GAGE   
Domains : Interpro (EBI)GAGE   
Related proteins : CluSTrQ13065
Domain families : Pfam (SRS)GAGE (PF05831)   
Domain families : Pfam (Sanger)GAGE (PF05831)   
Domain families : Pfam (NCBI)pfam05831   
DMDM2543
Blocks (Seattle)Q13065
Human Protein AtlasENSG00000205777
HPRD05028
Protein Interaction databases
DIP (DOE-UCLA)Q13065
IntAct (EBI)Q13065
FunCoupENSG00000205777
REACTOMEGAGE1
Protein Interaction Database2543
BioGRIDGAGE1
InParanoidQ13065
Interologous Interaction database Q13065
IntegromeDBGAGE1
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)GAGE1
SNP (GeneSNP Utah)GAGE1
SNP : HGBaseGAGE1
Genetic variants : HAPMAPGAGE1
Somatic Mutations in Cancer : COSMICGAGE1 
CONAN: Copy Number AnalysisGAGE1 
Mutations and Diseases : HGMDGAGE1
OMIM300594   
GENETests300594   
Disease Genetic AssociationGAGE1
Huge Navigator GAGE1 [HugePedia]  GAGE1 [HugeCancerGEM]
Genomic VariantsGAGE1  GAGE1 [DGVbeta]
snp3D : Map Gene to Disease2543
General knowledge
Homologs : HomoloGeneGAGE1
Homology/Alignments : Family Browser (UCSC)GAGE1
Phylogenetic Trees/Animal Genes : TreeFamGAGE1
Chemical/Protein Interactions : CTD2543
Chemical/Pharm GKB GenePA28513
Clinical trialGAGE1
Cancer Resource (Charite)ENSG00000205777
Ontology : AmiGOcellular defense response  
Ontology : EGO-EBIcellular defense response  
Other databases
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
PubGeneGAGE1
iHOPGAGE1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:50:41 CEST 2013
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