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GAGE12E (G antigen 12E)

Identity

Alias_symbol (synonym)OTTHUMG00000024146
Other aliasGAGE-12B
HGNC (Hugo) GAGE12E
LocusID (NCBI) 729431
Atlas_Id 63666
Location Xp11.23  [Link to chromosome band Xp11]
Location_base_pair Starts at 49532177 and ends at 49539541 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GAGE12E   31905
Cards
Entrez_Gene (NCBI)GAGE12E  729431  G antigen 12E
AliasesGAGE-12B
GeneCards (Weizmann)GAGE12E
Ensembl hg19 (Hinxton)ENSG00000216649 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000216649 [Gene_View]  chrX:49532177-49539541 [Contig_View]  GAGE12E [Vega]
ICGC DataPortalENSG00000216649
TCGA cBioPortalGAGE12E
AceView (NCBI)GAGE12E
Genatlas (Paris)GAGE12E
WikiGenes729431
SOURCE (Princeton)GAGE12E
Genetics Home Reference (NIH)GAGE12E
Genomic and cartography
GoldenPath hg38 (UCSC)GAGE12E  -     chrX:49532177-49539541 +  Xp11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GAGE12E  -     Xp11.23   [Description]    (hg19-Feb_2009)
EnsemblGAGE12E - Xp11.23 [CytoView hg19]  GAGE12E - Xp11.23 [CytoView hg38]
Mapping of homologs : NCBIGAGE12E [Mapview hg19]  GAGE12E [Mapview hg38]
OMIM300729   
Gene and transcription
Genbank (Entrez)HQ258058
RefSeq transcript (Entrez)NM_001098418
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GAGE12E
Cluster EST : UnigeneHs.632812 [ NCBI ]
CGAP (NCI)Hs.632812
Alternative Splicing GalleryENSG00000216649
Gene ExpressionGAGE12E [ NCBI-GEO ]   GAGE12E [ EBI - ARRAY_EXPRESS ]   GAGE12E [ SEEK ]   GAGE12E [ MEM ]
Gene Expression Viewer (FireBrowse)GAGE12E [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)729431
GTEX Portal (Tissue expression)GAGE12E
Protein : pattern, domain, 3D structure
UniProt/SwissProtA1L429   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA1L429  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA1L429
Splice isoforms : SwissVarA1L429
PhosPhoSitePlusA1L429
Domains : Interpro (EBI)GAGE    GAGE_fam   
Domain families : Pfam (Sanger)GAGE (PF05831)   
Domain families : Pfam (NCBI)pfam05831   
Domain families : Smart (EMBL)GAGE (SM01379)  
Conserved Domain (NCBI)GAGE12E
DMDM Disease mutations729431
Blocks (Seattle)GAGE12E
SuperfamilyA1L429
Human Protein AtlasENSG00000216649
Peptide AtlasA1L429
Protein Interaction databases
DIP (DOE-UCLA)A1L429
IntAct (EBI)A1L429
FunCoupENSG00000216649
BioGRIDGAGE12E
STRING (EMBL)GAGE12E
ZODIACGAGE12E
Ontologies - Pathways
QuickGOA1L429
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkGAGE12E
Atlas of Cancer Signalling NetworkGAGE12E
Wikipedia pathwaysGAGE12E
Orthology - Evolution
OrthoDB729431
GeneTree (enSembl)ENSG00000216649
Phylogenetic Trees/Animal Genes : TreeFamGAGE12E
HOVERGENA1L429
HOGENOMA1L429
Homologs : HomoloGeneGAGE12E
Homology/Alignments : Family Browser (UCSC)GAGE12E
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGAGE12E [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GAGE12E
dbVarGAGE12E
ClinVarGAGE12E
1000_GenomesGAGE12E 
Exome Variant ServerGAGE12E
ExAC (Exome Aggregation Consortium)GAGE12E (select the gene name)
Genetic variants : HAPMAP729431
Genomic Variants (DGV)GAGE12E [DGVbeta]
DECIPHERGAGE12E [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGAGE12E 
Mutations
ICGC Data PortalGAGE12E 
TCGA Data PortalGAGE12E 
Broad Tumor PortalGAGE12E
OASIS PortalGAGE92E[ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGAGE12E  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGAGE12E
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GAGE12E
DgiDB (Drug Gene Interaction Database)GAGE12E
DoCM (Curated mutations)GAGE12E (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GAGE12E (select a term)
intoGenGAGE12E
Cancer3DGAGE12E(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300729   
Orphanet
MedgenGAGE12E
Genetic Testing Registry GAGE12E
NextProtA1L429 [Medical]
TSGene729431
GENETestsGAGE12E
Target ValidationGAGE12E
Huge Navigator GAGE12E [HugePedia]
snp3D : Map Gene to Disease729431
BioCentury BCIQGAGE12E
ClinGenGAGE12E
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729431
Chemical/Pharm GKB GenePA145148775
Clinical trialGAGE12E
Miscellaneous
canSAR (ICR)GAGE12E (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGAGE12E
EVEXGAGE12E
GoPubMedGAGE12E
iHOPGAGE12E
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:09:06 CEST 2017

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