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GAGE2A (G antigen 2A)

Identity

Alias_namesGAGE2
G antigen 2
Alias_symbol (synonym)CT4.2
Other aliasGAGE-2
GAGE-2A
HGNC (Hugo) GAGE2A
LocusID (NCBI) 729447
Atlas_Id 63672
Location Xp11.23  [Link to chromosome band Xp11]
Location_base_pair Starts at 49589515 and ends at 49596827 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GAGE2A   4099
Cards
Entrez_Gene (NCBI)GAGE2A  729447  G antigen 2A
AliasesCT4.2; GAGE-2; GAGE-2A; GAGE2
GeneCards (Weizmann)GAGE2A
Ensembl hg19 (Hinxton)ENSG00000189064 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000189064 [Gene_View]  chrX:49589515-49596827 [Contig_View]  GAGE2A [Vega]
ICGC DataPortalENSG00000189064
TCGA cBioPortalGAGE2A
AceView (NCBI)GAGE2A
Genatlas (Paris)GAGE2A
WikiGenes729447
SOURCE (Princeton)GAGE2A
Genetics Home Reference (NIH)GAGE2A
Genomic and cartography
GoldenPath hg38 (UCSC)GAGE2A  -     chrX:49589515-49596827 +  Xp11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GAGE2A  -     Xp11.23   [Description]    (hg19-Feb_2009)
EnsemblGAGE2A - Xp11.23 [CytoView hg19]  GAGE2A - Xp11.23 [CytoView hg38]
Mapping of homologs : NCBIGAGE2A [Mapview hg19]  GAGE2A [Mapview hg38]
OMIM300720   
Gene and transcription
Genbank (Entrez)BC069309 BC069397 BC069558 BG184057 EC558573
RefSeq transcript (Entrez)NM_001127212
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GAGE2A
Cluster EST : UnigeneHs.722100 [ NCBI ]
CGAP (NCI)Hs.722100
Alternative Splicing GalleryENSG00000189064
Gene ExpressionGAGE2A [ NCBI-GEO ]   GAGE2A [ EBI - ARRAY_EXPRESS ]   GAGE2A [ SEEK ]   GAGE2A [ MEM ]
Gene Expression Viewer (FireBrowse)GAGE2A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)729447
GTEX Portal (Tissue expression)GAGE2A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6NT46   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6NT46  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6NT46
Splice isoforms : SwissVarQ6NT46
PhosPhoSitePlusQ6NT46
Domains : Interpro (EBI)GAGE    GAGE_fam   
Domain families : Pfam (Sanger)GAGE (PF05831)   
Domain families : Pfam (NCBI)pfam05831   
Domain families : Smart (EMBL)GAGE (SM01379)  
Conserved Domain (NCBI)GAGE2A
DMDM Disease mutations729447
Blocks (Seattle)GAGE2A
SuperfamilyQ6NT46
Human Protein AtlasENSG00000189064
Peptide AtlasQ6NT46
Protein Interaction databases
DIP (DOE-UCLA)Q6NT46
IntAct (EBI)Q6NT46
FunCoupENSG00000189064
BioGRIDGAGE2A
STRING (EMBL)GAGE2A
ZODIACGAGE2A
Ontologies - Pathways
QuickGOQ6NT46
Ontology : AmiGOmolecular_function  cellular_component  biological_process  
Ontology : EGO-EBImolecular_function  cellular_component  biological_process  
NDEx NetworkGAGE2A
Atlas of Cancer Signalling NetworkGAGE2A
Wikipedia pathwaysGAGE2A
Orthology - Evolution
OrthoDB729447
GeneTree (enSembl)ENSG00000189064
Phylogenetic Trees/Animal Genes : TreeFamGAGE2A
HOVERGENQ6NT46
HOGENOMQ6NT46
Homologs : HomoloGeneGAGE2A
Homology/Alignments : Family Browser (UCSC)GAGE2A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGAGE2A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GAGE2A
dbVarGAGE2A
ClinVarGAGE2A
1000_GenomesGAGE2A 
Exome Variant ServerGAGE2A
ExAC (Exome Aggregation Consortium)GAGE2A (select the gene name)
Genetic variants : HAPMAP729447
Genomic Variants (DGV)GAGE2A [DGVbeta]
DECIPHERGAGE2A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGAGE2A 
Mutations
ICGC Data PortalGAGE2A 
TCGA Data PortalGAGE2A 
Broad Tumor PortalGAGE2A
OASIS PortalGAGE2A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGAGE2A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGAGE2A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GAGE2A
DgiDB (Drug Gene Interaction Database)GAGE2A
DoCM (Curated mutations)GAGE2A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GAGE2A (select a term)
intoGenGAGE2A
Cancer3DGAGE2A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300720   
Orphanet
MedgenGAGE2A
Genetic Testing Registry GAGE2A
NextProtQ6NT46 [Medical]
TSGene729447
GENETestsGAGE2A
Target ValidationGAGE2A
Huge Navigator GAGE2A [HugePedia]
snp3D : Map Gene to Disease729447
BioCentury BCIQGAGE2A
ClinGenGAGE2A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729447
Chemical/Pharm GKB GenePA162389230
Clinical trialGAGE2A
Miscellaneous
canSAR (ICR)GAGE2A (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGAGE2A
EVEXGAGE2A
GoPubMedGAGE2A
iHOPGAGE2A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:50:12 CEST 2017

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