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GAGE2C (G antigen 2C)

Identity

Alias (NCBI)CT4.2
GAGE-2
GAGE-2C
GAGE2
HGNC (Hugo) GAGE2C
LocusID (NCBI) 2574
Atlas_Id 40670
Location Xp11.23  [Link to chromosome band Xp11]
Location_base_pair Starts at 49589529 and ends at 49596837 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)GAGE2C   31958
Cards
Entrez_Gene (NCBI)GAGE2C    G antigen 2C
AliasesCT4.2; GAGE-2; GAGE-2C; GAGE2
GeneCards (Weizmann)GAGE2C
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chrX:49589529-49596837 [Contig_View]  GAGE2C [Vega]
TCGA cBioPortalGAGE2C
AceView (NCBI)GAGE2C
Genatlas (Paris)GAGE2C
SOURCE (Princeton)GAGE2C
Genetics Home Reference (NIH)GAGE2C
Genomic and cartography
GoldenPath hg38 (UCSC)GAGE2C  -     chrX:49589529-49596837 +  Xp11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GAGE2C  -     Xp11.23   [Description]    (hg19-Feb_2009)
GoldenPathGAGE2C - Xp11.23 [CytoView hg19]  GAGE2C - Xp11.23 [CytoView hg38]
Genome Data Viewer NCBIGAGE2C [Mapview hg19]  
OMIM300595   
Gene and transcription
Genbank (Entrez)BC113926 U19143
RefSeq transcript (Entrez)NM_001472
Consensus coding sequences : CCDS (NCBI)GAGE2C
Gene ExpressionGAGE2C [ NCBI-GEO ]   GAGE2C [ EBI - ARRAY_EXPRESS ]   GAGE2C [ SEEK ]   GAGE2C [ MEM ]
Gene Expression Viewer (FireBrowse)GAGE2C [ Firebrowse - Broad ]
GenevisibleExpression of GAGE2C in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2574
GTEX Portal (Tissue expression)GAGE2C
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ13066   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ13066  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ13066
PhosPhoSitePlusQ13066
Domains : Interpro (EBI)GAGE    GAGE_fam   
Domain families : Pfam (Sanger)GAGE (PF05831)   
Domain families : Pfam (NCBI)pfam05831   
Domain families : Smart (EMBL)GAGE (SM01379)  
Conserved Domain (NCBI)GAGE2C
SuperfamilyQ13066
AlphaFold pdb e-kbQ13066   
HPRD05029
Protein Interaction databases
DIP (DOE-UCLA)Q13066
IntAct (EBI)Q13066
BioGRIDGAGE2C
STRING (EMBL)GAGE2C
ZODIACGAGE2C
Ontologies - Pathways
QuickGOQ13066
Ontology : AmiGOmolecular_function  protein binding  cellular_component  biological_process  
Ontology : EGO-EBImolecular_function  protein binding  cellular_component  biological_process  
NDEx NetworkGAGE2C
Atlas of Cancer Signalling NetworkGAGE2C
Wikipedia pathwaysGAGE2C
Orthology - Evolution
OrthoDB2574
Phylogenetic Trees/Animal Genes : TreeFamGAGE2C
Homologs : HomoloGeneGAGE2C
Homology/Alignments : Family Browser (UCSC)GAGE2C
Gene fusions - Rearrangements
Fusion : QuiverGAGE2C
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGAGE2C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GAGE2C
dbVarGAGE2C
ClinVarGAGE2C
MonarchGAGE2C
1000_GenomesGAGE2C 
Exome Variant ServerGAGE2C
Varsome BrowserGAGE2C
ACMGGAGE2C variants
VarityQ13066
Genomic Variants (DGV)GAGE2C [DGVbeta]
DECIPHERGAGE2C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGAGE2C 
Mutations
ICGC Data PortalGAGE2C 
TCGA Data PortalGAGE2C 
Broad Tumor PortalGAGE2C
OASIS PortalGAGE2C [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDGAGE2C
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaGAGE2C
DgiDB (Drug Gene Interaction Database)GAGE2C
DoCM (Curated mutations)GAGE2C
CIViC (Clinical Interpretations of Variants in Cancer)GAGE2C
Cancer3DGAGE2C
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300595   
Orphanet
DisGeNETGAGE2C
MedgenGAGE2C
Genetic Testing Registry GAGE2C
NextProtQ13066 [Medical]
GENETestsGAGE2C
Target ValidationGAGE2C
Huge Navigator GAGE2C [HugePedia]
ClinGenGAGE2C
Clinical trials, drugs, therapy
MyCancerGenomeGAGE2C
Protein Interactions : CTDGAGE2C
Pharm GKB GenePA162389260
PharosQ13066
Clinical trialGAGE2C
Miscellaneous
canSAR (ICR)GAGE2C
HarmonizomeGAGE2C
DataMed IndexGAGE2C
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXGAGE2C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:10:16 CEST 2021

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