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GAGE2E (G antigen 2E)

Identity

Alias_symbol (synonym)GAGE8
Other aliasGAGE-2E
HGNC (Hugo) GAGE2E
LocusID (NCBI) 26749
Atlas_Id 40676
Location Xp11.23  [Link to chromosome band Xp11]
Location_base_pair Starts at 49331584 and ends at 49338962 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GAGE2E   31960
Cards
Entrez_Gene (NCBI)GAGE2E  26749  G antigen 2E
AliasesGAGE-2E; GAGE8
GeneCards (Weizmann)GAGE2E
Ensembl hg19 (Hinxton)ENSG00000236362 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236362 [Gene_View]  chrX:49331584-49338962 [Contig_View]  GAGE2E [Vega]
ICGC DataPortalENSG00000236362
TCGA cBioPortalGAGE2E
AceView (NCBI)GAGE2E
Genatlas (Paris)GAGE2E
WikiGenes26749
SOURCE (Princeton)GAGE2E
Genetics Home Reference (NIH)GAGE2E
Genomic and cartography
GoldenPath hg38 (UCSC)GAGE2E  -     chrX:49331584-49338962 +  Xp11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GAGE2E  -     Xp11.23   [Description]    (hg19-Feb_2009)
EnsemblGAGE2E - Xp11.23 [CytoView hg19]  GAGE2E - Xp11.23 [CytoView hg38]
Mapping of homologs : NCBIGAGE2E [Mapview hg19]  GAGE2E [Mapview hg38]
OMIM300736   
Gene and transcription
Genbank (Entrez)AW629134 BC018052 HY204089
RefSeq transcript (Entrez)NM_001127200
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GAGE2E
Cluster EST : UnigeneHs.695912 [ NCBI ]
CGAP (NCI)Hs.695912
Alternative Splicing GalleryENSG00000236362
Gene ExpressionGAGE2E [ NCBI-GEO ]   GAGE2E [ EBI - ARRAY_EXPRESS ]   GAGE2E [ SEEK ]   GAGE2E [ MEM ]
Gene Expression Viewer (FireBrowse)GAGE2E [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26749
GTEX Portal (Tissue expression)GAGE2E
Human Protein AtlasENSG00000236362-GAGE2E [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ4V326   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ4V326  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ4V326
Splice isoforms : SwissVarQ4V326
PhosPhoSitePlusQ4V326
Domains : Interpro (EBI)GAGE    GAGE_fam   
Domain families : Pfam (Sanger)GAGE (PF05831)   
Domain families : Pfam (NCBI)pfam05831   
Domain families : Smart (EMBL)GAGE (SM01379)  
Conserved Domain (NCBI)GAGE2E
DMDM Disease mutations26749
Blocks (Seattle)GAGE2E
SuperfamilyQ4V326
Human Protein Atlas [tissue]ENSG00000236362-GAGE2E [tissue]
Peptide AtlasQ4V326
HPRD06574
IPIIPI00639833   
Protein Interaction databases
DIP (DOE-UCLA)Q4V326
IntAct (EBI)Q4V326
FunCoupENSG00000236362
BioGRIDGAGE2E
STRING (EMBL)GAGE2E
ZODIACGAGE2E
Ontologies - Pathways
QuickGOQ4V326
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkGAGE2E
Atlas of Cancer Signalling NetworkGAGE2E
Wikipedia pathwaysGAGE2E
Orthology - Evolution
OrthoDB26749
GeneTree (enSembl)ENSG00000236362
Phylogenetic Trees/Animal Genes : TreeFamGAGE2E
HOVERGENQ4V326
HOGENOMQ4V326
Homologs : HomoloGeneGAGE2E
Homology/Alignments : Family Browser (UCSC)GAGE2E
Gene fusions - Rearrangements
Tumor Fusion PortalGAGE2E
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGAGE2E [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GAGE2E
dbVarGAGE2E
ClinVarGAGE2E
1000_GenomesGAGE2E 
Exome Variant ServerGAGE2E
ExAC (Exome Aggregation Consortium)ENSG00000236362
GNOMAD BrowserENSG00000236362
Genetic variants : HAPMAP26749
Genomic Variants (DGV)GAGE2E [DGVbeta]
DECIPHERGAGE2E [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGAGE2E 
Mutations
ICGC Data PortalGAGE2E 
TCGA Data PortalGAGE2E 
Broad Tumor PortalGAGE2E
OASIS PortalGAGE2E [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDGAGE2E
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GAGE2E
DgiDB (Drug Gene Interaction Database)GAGE2E
DoCM (Curated mutations)GAGE2E (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GAGE2E (select a term)
intoGenGAGE2E
Cancer3DGAGE2E(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300736   
Orphanet
DisGeNETGAGE2E
MedgenGAGE2E
Genetic Testing Registry GAGE2E
NextProtQ4V326 [Medical]
TSGene26749
GENETestsGAGE2E
Target ValidationGAGE2E
Huge Navigator GAGE2E [HugePedia]
snp3D : Map Gene to Disease26749
BioCentury BCIQGAGE2E
ClinGenGAGE2E
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26749
Chemical/Pharm GKB GenePA162389276
Clinical trialGAGE2E
Miscellaneous
canSAR (ICR)GAGE2E (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGAGE2E
EVEXGAGE2E
GoPubMedGAGE2E
iHOPGAGE2E
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:14:07 CET 2017

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