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GAGE7 (G antigen 7)

Identity

Alias_symbol (synonym)GAGE-7
CT4.7
Other aliasAL4
HGNC (Hugo) GAGE7
LocusID (NCBI) 2579
Atlas_Id 63675
Location Xp11.23  [Link to chromosome band Xp11]
Location_base_pair Starts at 49341211 and ends at 49529981 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GAGE7   4104
Cards
Entrez_Gene (NCBI)GAGE7  2579  G antigen 7
AliasesAL4; CT4.7; GAGE-7
GeneCards (Weizmann)GAGE7
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:49341211-49529981 [Contig_View]  GAGE7 [Vega]
TCGA cBioPortalGAGE7
AceView (NCBI)GAGE7
Genatlas (Paris)GAGE7
WikiGenes2579
SOURCE (Princeton)GAGE7
Genetics Home Reference (NIH)GAGE7
Genomic and cartography
GoldenPath hg38 (UCSC)GAGE7  -     chrX:49341211-49529981 +  Xp11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GAGE7  -     Xp11.23   [Description]    (hg19-Feb_2009)
EnsemblGAGE7 - Xp11.23 [CytoView hg19]  GAGE7 - Xp11.23 [CytoView hg38]
Mapping of homologs : NCBIGAGE7 [Mapview hg19]  GAGE7 [Mapview hg38]
OMIM300601   
Gene and transcription
Genbank (Entrez)AF055474 AF058988 BC031628 BC069086 BC081536
RefSeq transcript (Entrez)NM_021123
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GAGE7
Cluster EST : UnigeneHs.695912 [ NCBI ]
CGAP (NCI)Hs.695912
Gene ExpressionGAGE7 [ NCBI-GEO ]   GAGE7 [ EBI - ARRAY_EXPRESS ]   GAGE7 [ SEEK ]   GAGE7 [ MEM ]
Gene Expression Viewer (FireBrowse)GAGE7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2579
GTEX Portal (Tissue expression)GAGE7
Protein : pattern, domain, 3D structure
UniProt/SwissProtO76087   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO76087  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO76087
Splice isoforms : SwissVarO76087
PhosPhoSitePlusO76087
Domains : Interpro (EBI)GAGE    GAGE_fam   
Domain families : Pfam (Sanger)GAGE (PF05831)   
Domain families : Pfam (NCBI)pfam05831   
Domain families : Smart (EMBL)GAGE (SM01379)  
Conserved Domain (NCBI)GAGE7
DMDM Disease mutations2579
Blocks (Seattle)GAGE7
SuperfamilyO76087
Peptide AtlasO76087
HPRD04993
Protein Interaction databases
DIP (DOE-UCLA)O76087
IntAct (EBI)O76087
BioGRIDGAGE7
STRING (EMBL)GAGE7
ZODIACGAGE7
Ontologies - Pathways
QuickGOO76087
Ontology : AmiGOmolecular_function  cellular_component  biological_process  
Ontology : EGO-EBImolecular_function  cellular_component  biological_process  
NDEx NetworkGAGE7
Atlas of Cancer Signalling NetworkGAGE7
Wikipedia pathwaysGAGE7
Orthology - Evolution
OrthoDB2579
Phylogenetic Trees/Animal Genes : TreeFamGAGE7
HOVERGENO76087
HOGENOMO76087
Homologs : HomoloGeneGAGE7
Homology/Alignments : Family Browser (UCSC)GAGE7
Gene fusions - Rearrangements
Tumor Fusion PortalGAGE7
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGAGE7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GAGE7
dbVarGAGE7
ClinVarGAGE7
1000_GenomesGAGE7 
Exome Variant ServerGAGE7
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP2579
Genomic Variants (DGV)GAGE7 [DGVbeta]
DECIPHERGAGE7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGAGE7 
Mutations
ICGC Data PortalGAGE7 
TCGA Data PortalGAGE7 
Broad Tumor PortalGAGE7
OASIS PortalGAGE7 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDGAGE7
BioMutasearch GAGE7
DgiDB (Drug Gene Interaction Database)GAGE7
DoCM (Curated mutations)GAGE7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GAGE7 (select a term)
intoGenGAGE7
Cancer3DGAGE7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300601   
Orphanet
DisGeNETGAGE7
MedgenGAGE7
Genetic Testing Registry GAGE7
NextProtO76087 [Medical]
TSGene2579
GENETestsGAGE7
Target ValidationGAGE7
Huge Navigator GAGE7 [HugePedia]
snp3D : Map Gene to Disease2579
BioCentury BCIQGAGE7
ClinGenGAGE7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2579
Chemical/Pharm GKB GenePA28519
Clinical trialGAGE7
Miscellaneous
canSAR (ICR)GAGE7 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGAGE7
EVEXGAGE7
GoPubMedGAGE7
iHOPGAGE7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:30:47 CET 2017

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