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GALP (galanin like peptide)

Identity

Other alias-
HGNC (Hugo) GALP
LocusID (NCBI) 85569
Atlas_Id 63693
Location 19q13.43  [Link to chromosome band 19q13]
Location_base_pair Starts at 56176020 and ends at 56185775 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GALP   24840
Cards
Entrez_Gene (NCBI)GALP  85569  galanin like peptide
Aliases
GeneCards (Weizmann)GALP
Ensembl hg19 (Hinxton)ENSG00000197487 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197487 [Gene_View]  chr19:56176020-56185775 [Contig_View]  GALP [Vega]
ICGC DataPortalENSG00000197487
TCGA cBioPortalGALP
AceView (NCBI)GALP
Genatlas (Paris)GALP
WikiGenes85569
SOURCE (Princeton)GALP
Genetics Home Reference (NIH)GALP
Genomic and cartography
GoldenPath hg38 (UCSC)GALP  -     chr19:56176020-56185775 +  19q13.43   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GALP  -     19q13.43   [Description]    (hg19-Feb_2009)
EnsemblGALP - 19q13.43 [CytoView hg19]  GALP - 19q13.43 [CytoView hg38]
Mapping of homologs : NCBIGALP [Mapview hg19]  GALP [Mapview hg38]
OMIM611178   
Gene and transcription
Genbank (Entrez)AF188492 AF188493 AY329637 BC141468 BC148722
RefSeq transcript (Entrez)NM_001145546 NM_033106
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GALP
Cluster EST : UnigeneHs.283915 [ NCBI ]
CGAP (NCI)Hs.283915
Alternative Splicing GalleryENSG00000197487
Gene ExpressionGALP [ NCBI-GEO ]   GALP [ EBI - ARRAY_EXPRESS ]   GALP [ SEEK ]   GALP [ MEM ]
Gene Expression Viewer (FireBrowse)GALP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)85569
GTEX Portal (Tissue expression)GALP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UBC7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UBC7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UBC7
Splice isoforms : SwissVarQ9UBC7
PhosPhoSitePlusQ9UBC7
Domaine pattern : Prosite (Expaxy)GALANIN (PS00861)   
Domains : Interpro (EBI)Galanin   
Domain families : Pfam (Sanger)Galanin (PF01296)   
Domain families : Pfam (NCBI)pfam01296   
Conserved Domain (NCBI)GALP
DMDM Disease mutations85569
Blocks (Seattle)GALP
SuperfamilyQ9UBC7
Human Protein AtlasENSG00000197487
Peptide AtlasQ9UBC7
HPRD17027
IPIIPI00011579   IPI00827730   
Protein Interaction databases
DIP (DOE-UCLA)Q9UBC7
IntAct (EBI)Q9UBC7
FunCoupENSG00000197487
BioGRIDGALP
STRING (EMBL)GALP
ZODIACGALP
Ontologies - Pathways
QuickGOQ9UBC7
Ontology : AmiGOhormone activity  cellular_component  extracellular region  neuropeptide signaling pathway  biological_process  regulation of appetite  response to insulin  behavioral response to starvation  defense response to bacterium  
Ontology : EGO-EBIhormone activity  cellular_component  extracellular region  neuropeptide signaling pathway  biological_process  regulation of appetite  response to insulin  behavioral response to starvation  defense response to bacterium  
NDEx NetworkGALP
Atlas of Cancer Signalling NetworkGALP
Wikipedia pathwaysGALP
Orthology - Evolution
OrthoDB85569
GeneTree (enSembl)ENSG00000197487
Phylogenetic Trees/Animal Genes : TreeFamGALP
HOVERGENQ9UBC7
HOGENOMQ9UBC7
Homologs : HomoloGeneGALP
Homology/Alignments : Family Browser (UCSC)GALP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGALP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GALP
dbVarGALP
ClinVarGALP
1000_GenomesGALP 
Exome Variant ServerGALP
ExAC (Exome Aggregation Consortium)GALP (select the gene name)
Genetic variants : HAPMAP85569
Genomic Variants (DGV)GALP [DGVbeta]
DECIPHERGALP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGALP 
Mutations
ICGC Data PortalGALP 
TCGA Data PortalGALP 
Broad Tumor PortalGALP
OASIS PortalGALP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGALP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGALP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GALP
DgiDB (Drug Gene Interaction Database)GALP
DoCM (Curated mutations)GALP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GALP (select a term)
intoGenGALP
Cancer3DGALP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611178   
Orphanet
MedgenGALP
Genetic Testing Registry GALP
NextProtQ9UBC7 [Medical]
TSGene85569
GENETestsGALP
Huge Navigator GALP [HugePedia]
snp3D : Map Gene to Disease85569
BioCentury BCIQGALP
ClinGenGALP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD85569
Chemical/Pharm GKB GenePA162389277
Clinical trialGALP
Miscellaneous
canSAR (ICR)GALP (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGALP
EVEXGALP
GoPubMedGALP
iHOPGALP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:13:18 CEST 2017

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