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GALR3 (galanin receptor 3)

Identity

Other alias-
HGNC (Hugo) GALR3
LocusID (NCBI) 8484
Atlas_Id 46177
Location 22q13.1  [Link to chromosome band 22q13]
Location_base_pair Starts at 37823382 and ends at 37825495 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GALR3   4134
Cards
Entrez_Gene (NCBI)GALR3  8484  galanin receptor 3
Aliases
GeneCards (Weizmann)GALR3
Ensembl hg19 (Hinxton)ENSG00000128310 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000128310 [Gene_View]  chr22:37823382-37825495 [Contig_View]  GALR3 [Vega]
ICGC DataPortalENSG00000128310
TCGA cBioPortalGALR3
AceView (NCBI)GALR3
Genatlas (Paris)GALR3
WikiGenes8484
SOURCE (Princeton)GALR3
Genetics Home Reference (NIH)GALR3
Genomic and cartography
GoldenPath hg38 (UCSC)GALR3  -     chr22:37823382-37825495 +  22q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GALR3  -     22q13.1   [Description]    (hg19-Feb_2009)
EnsemblGALR3 - 22q13.1 [CytoView hg19]  GALR3 - 22q13.1 [CytoView hg38]
Mapping of homologs : NCBIGALR3 [Mapview hg19]  GALR3 [Mapview hg38]
OMIM603692   
Gene and transcription
Genbank (Entrez)AF067733 AF073799 AY587582 BC172236
RefSeq transcript (Entrez)NM_003614
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GALR3
Cluster EST : UnigeneHs.158353 [ NCBI ]
CGAP (NCI)Hs.158353
Alternative Splicing GalleryENSG00000128310
Gene ExpressionGALR3 [ NCBI-GEO ]   GALR3 [ EBI - ARRAY_EXPRESS ]   GALR3 [ SEEK ]   GALR3 [ MEM ]
Gene Expression Viewer (FireBrowse)GALR3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8484
GTEX Portal (Tissue expression)GALR3
Protein : pattern, domain, 3D structure
UniProt/SwissProtO60755   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO60755  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO60755
Splice isoforms : SwissVarO60755
PhosPhoSitePlusO60755
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)Galanin_rcpt    Galnin_3_rcpt    GPCR_Rhodpsn    GPCR_Rhodpsn_7TM   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)GALR3
DMDM Disease mutations8484
Blocks (Seattle)GALR3
SuperfamilyO60755
Human Protein AtlasENSG00000128310
Peptide AtlasO60755
HPRD04736
IPIIPI00031548   
Protein Interaction databases
DIP (DOE-UCLA)O60755
IntAct (EBI)O60755
FunCoupENSG00000128310
BioGRIDGALR3
STRING (EMBL)GALR3
ZODIACGALR3
Ontologies - Pathways
QuickGOO60755
Ontology : AmiGOgalanin receptor activity  plasma membrane  integral component of plasma membrane  adenylate cyclase-modulating G-protein coupled receptor signaling pathway  negative regulation of adenylate cyclase activity  phospholipase C-activating G-protein coupled receptor signaling pathway  neuropeptide signaling pathway  chemical synaptic transmission  learning or memory  feeding behavior  integral component of membrane  peptide hormone binding  positive regulation of transcription from RNA polymerase II promoter  
Ontology : EGO-EBIgalanin receptor activity  plasma membrane  integral component of plasma membrane  adenylate cyclase-modulating G-protein coupled receptor signaling pathway  negative regulation of adenylate cyclase activity  phospholipase C-activating G-protein coupled receptor signaling pathway  neuropeptide signaling pathway  chemical synaptic transmission  learning or memory  feeding behavior  integral component of membrane  peptide hormone binding  positive regulation of transcription from RNA polymerase II promoter  
Pathways : KEGGNeuroactive ligand-receptor interaction   
NDEx NetworkGALR3
Atlas of Cancer Signalling NetworkGALR3
Wikipedia pathwaysGALR3
Orthology - Evolution
OrthoDB8484
GeneTree (enSembl)ENSG00000128310
Phylogenetic Trees/Animal Genes : TreeFamGALR3
HOVERGENO60755
HOGENOMO60755
Homologs : HomoloGeneGALR3
Homology/Alignments : Family Browser (UCSC)GALR3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGALR3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GALR3
dbVarGALR3
ClinVarGALR3
1000_GenomesGALR3 
Exome Variant ServerGALR3
ExAC (Exome Aggregation Consortium)GALR3 (select the gene name)
Genetic variants : HAPMAP8484
Genomic Variants (DGV)GALR3 [DGVbeta]
DECIPHERGALR3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGALR3 
Mutations
ICGC Data PortalGALR3 
TCGA Data PortalGALR3 
Broad Tumor PortalGALR3
OASIS PortalGALR3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGALR3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGALR3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GALR3
DgiDB (Drug Gene Interaction Database)GALR3
DoCM (Curated mutations)GALR3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GALR3 (select a term)
intoGenGALR3
Cancer3DGALR3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603692   
Orphanet
MedgenGALR3
Genetic Testing Registry GALR3
NextProtO60755 [Medical]
TSGene8484
GENETestsGALR3
Huge Navigator GALR3 [HugePedia]
snp3D : Map Gene to Disease8484
BioCentury BCIQGALR3
ClinGenGALR3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8484
Chemical/Pharm GKB GenePA28547
Clinical trialGALR3
Miscellaneous
canSAR (ICR)GALR3 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGALR3
EVEXGALR3
GoPubMedGALR3
iHOPGALR3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:16:52 CEST 2017

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