Atlas of Genetics and Cytogenetics in Oncology and Haematology

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GALR3 (galanin receptor 3)

Identity

Other names-
HGNC (Hugo) GALR3
LocusID (NCBI) 8484
Location 22q13.1
Location_base_pair Starts at 38219389 and ends at 38221502 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)GALR3   4134
Entrez_Gene (NCBI)GALR3  8484  galanin receptor 3
Cards
GeneCards (Weizmann)GALR3
Ensembl (Hinxton)ENSG00000128310 [Gene_View]  chr22:38219389-38221502 [Contig_View]  GALR3 [Vega]
AceView (NCBI)GALR3
Genatlas (Paris)GALR3
SOURCE (Stanford)NM_003614
Genomic and cartography
GoldenPath (UCSC)GALR3  -  22q13.1   chr22:38219389-38221502 +  22q13.1   [Description]    (hg19-Feb_2009)
EnsemblGALR3 - 22q13.1 [CytoView]
Mapping of homologs : NCBIGALR3 [Mapview]
OMIM603692   
Gene and transcription
Genbank (Entrez)AF067733 AF073799 AY587582 BC172236
RefSeq transcript (SRS)NM_003614
RefSeq transcript (Entrez)NM_003614
RefSeq genomic (SRS)AC_000154 NC_000022 NC_018933 NT_011520 NW_001838745 NW_004078112
RefSeq genomic (Entrez)AC_000154 NC_000022 NC_018933 NT_011520 NW_001838745 NW_004078112
Consensus coding sequences : CCDS (NCBI)GALR3
Cluster EST : UnigeneHs.158353 [ SRS ] Hs.158353 [ NCBI ]
CGAP (NCI)Hs.158353
Alternative Splicing : Fast-db (Paris)GSHG0019999
Alternative Splicing GalleryENSG00000128310
Gene ExpressionGALR3 [ NCBI-GEO ]   GALR3 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO60755 (SRS) O60755 (Uniprot)
NextProtO60755
With graphics : InterProO60755
Splice isoforms : SwissVarO60755(Swissvar)
Domaine pattern : Prosite (SRS)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (SRS)7TM_GPCR_Rhodpsn    Galanin_rcpt    Galnin_3_rcpt    GPCR_Rhodpsn_supfam   
Domains : Interpro (EBI)7TM_GPCR_Rhodpsn    Galanin_rcpt    Galnin_3_rcpt    GPCR_Rhodpsn_supfam   
Related proteins : CluSTrO60755
Domain families : Pfam (SRS)7tm_1 (PF00001)   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
DMDM8484
Blocks (Seattle)O60755
Human Protein AtlasENSG00000128310
HPRD04736
IPIIPI00031548   
Protein Interaction databases
DIP (DOE-UCLA)O60755
IntAct (EBI)O60755
FunCoupENSG00000128310
REACTOMEGALR3
Protein Interaction Database8484
BioGRIDGALR3
InParanoidO60755
Interologous Interaction database O60755
IntegromeDBGALR3
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)GALR3
SNP (GeneSNP Utah)GALR3
SNP : HGBaseGALR3
Genetic variants : HAPMAPGALR3
Somatic Mutations in Cancer : COSMICGALR3 
CONAN: Copy Number AnalysisGALR3 
Mutations and Diseases : HGMDGALR3
OMIM603692   
GENETests603692   
Disease Genetic AssociationGALR3
Huge Navigator GALR3 [HugePedia]  GALR3 [HugeCancerGEM]
Genomic VariantsGALR3  GALR3 [DGVbeta]
snp3D : Map Gene to Disease8484
General knowledge
Homologs : HomoloGeneGALR3
Homology/Alignments : Family Browser (UCSC)GALR3
Phylogenetic Trees/Animal Genes : TreeFamGALR3
Chemical/Protein Interactions : CTD8484
Chemical/Pharm GKB GenePA28547
Clinical trialGALR3
Cancer Resource (Charite)ENSG00000128310
Ontology : AmiGOgalanin receptor activity  plasma membrane  negative regulation of adenylate cyclase activity  neuropeptide signaling pathway  synaptic transmission  learning or memory  feeding behavior  integral to membrane  
Ontology : EGO-EBIgalanin receptor activity  plasma membrane  negative regulation of adenylate cyclase activity  neuropeptide signaling pathway  synaptic transmission  learning or memory  feeding behavior  integral to membrane  
Pathways : KEGGNeuroactive ligand-receptor interaction
Other databases
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
PubGeneGALR3
iHOPGALR3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:47:38 CEST 2013
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