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GANC (glucosidase alpha, neutral C)

Identity

Alias_namesglucosidase, alpha; neutral C
Other alias-
HGNC (Hugo) GANC
LocusID (NCBI) 2595
Atlas_Id 63696
Location 15q15.1  [Link to chromosome band 15q15]
Location_base_pair Starts at 42273658 and ends at 42314833 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GANC (15q15.1) / GANC (15q15.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GANC   4139
Cards
Entrez_Gene (NCBI)GANC  2595  glucosidase alpha, neutral C
Aliases
GeneCards (Weizmann)GANC
Ensembl hg19 (Hinxton)ENSG00000214013 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214013 [Gene_View]  chr15:42273658-42314833 [Contig_View]  GANC [Vega]
ICGC DataPortalENSG00000214013
TCGA cBioPortalGANC
AceView (NCBI)GANC
Genatlas (Paris)GANC
WikiGenes2595
SOURCE (Princeton)GANC
Genetics Home Reference (NIH)GANC
Genomic and cartography
GoldenPath hg38 (UCSC)GANC  -     chr15:42273658-42314833 +  15q15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GANC  -     15q15.1   [Description]    (hg19-Feb_2009)
EnsemblGANC - 15q15.1 [CytoView hg19]  GANC - 15q15.1 [CytoView hg38]
Mapping of homologs : NCBIGANC [Mapview hg19]  GANC [Mapview hg38]
OMIM104180   
Gene and transcription
Genbank (Entrez)AF525397 AF545045 AF545046 AK074037 AK074330
RefSeq transcript (Entrez)NM_001301409 NM_001301410 NM_198141
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GANC
Cluster EST : UnigeneHs.730806 [ NCBI ]
CGAP (NCI)Hs.730806
Alternative Splicing GalleryENSG00000214013
Gene ExpressionGANC [ NCBI-GEO ]   GANC [ EBI - ARRAY_EXPRESS ]   GANC [ SEEK ]   GANC [ MEM ]
Gene Expression Viewer (FireBrowse)GANC [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2595
GTEX Portal (Tissue expression)GANC
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TET4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TET4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TET4
Splice isoforms : SwissVarQ8TET4
PhosPhoSitePlusQ8TET4
Domaine pattern : Prosite (Expaxy)GLYCOSYL_HYDROL_F31_1 (PS00129)   
Domains : Interpro (EBI)Gal_mutarotase_SF_dom    Glyco_hydro_31    Glyco_hydro_31_AS    Glyco_hydro_31_N_dom    Glycoside_hydrolase_SF   
Domain families : Pfam (Sanger)Gal_mutarotas_2 (PF13802)    Glyco_hydro_31 (PF01055)   
Domain families : Pfam (NCBI)pfam13802    pfam01055   
Conserved Domain (NCBI)GANC
DMDM Disease mutations2595
Blocks (Seattle)GANC
SuperfamilyQ8TET4
Human Protein AtlasENSG00000214013
Peptide AtlasQ8TET4
HPRD00077
IPIIPI00291827   IPI00911090   
Protein Interaction databases
DIP (DOE-UCLA)Q8TET4
IntAct (EBI)Q8TET4
FunCoupENSG00000214013
BioGRIDGANC
STRING (EMBL)GANC
ZODIACGANC
Ontologies - Pathways
QuickGOQ8TET4
Ontology : AmiGOmaltose metabolic process  alpha-1,4-glucosidase activity  carbohydrate binding  maltose alpha-glucosidase activity  
Ontology : EGO-EBImaltose metabolic process  alpha-1,4-glucosidase activity  carbohydrate binding  maltose alpha-glucosidase activity  
Pathways : KEGGGalactose metabolism    Starch and sucrose metabolism   
NDEx NetworkGANC
Atlas of Cancer Signalling NetworkGANC
Wikipedia pathwaysGANC
Orthology - Evolution
OrthoDB2595
GeneTree (enSembl)ENSG00000214013
Phylogenetic Trees/Animal Genes : TreeFamGANC
HOVERGENQ8TET4
HOGENOMQ8TET4
Homologs : HomoloGeneGANC
Homology/Alignments : Family Browser (UCSC)GANC
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGANC [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GANC
dbVarGANC
ClinVarGANC
1000_GenomesGANC 
Exome Variant ServerGANC
ExAC (Exome Aggregation Consortium)GANC (select the gene name)
Genetic variants : HAPMAP2595
Genomic Variants (DGV)GANC [DGVbeta]
DECIPHERGANC [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGANC 
Mutations
ICGC Data PortalGANC 
TCGA Data PortalGANC 
Broad Tumor PortalGANC
OASIS PortalGANC [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGANC  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGANC
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GANC
DgiDB (Drug Gene Interaction Database)GANC
DoCM (Curated mutations)GANC (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GANC (select a term)
intoGenGANC
Cancer3DGANC(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM104180   
Orphanet
MedgenGANC
Genetic Testing Registry GANC
NextProtQ8TET4 [Medical]
TSGene2595
GENETestsGANC
Target ValidationGANC
Huge Navigator GANC [HugePedia]
snp3D : Map Gene to Disease2595
BioCentury BCIQGANC
ClinGenGANC
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2595
Chemical/Pharm GKB GenePA28552
Clinical trialGANC
Miscellaneous
canSAR (ICR)GANC (select the gene name)
Probes
Litterature
PubMed52 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGANC
EVEXGANC
GoPubMedGANC
iHOPGANC
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:50:17 CEST 2017

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