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GAREML (GRB2 associated, regulator of MAPK1-like)

Identity

Other aliasFAM59B
HGNC (Hugo) GAREML
LocusID (NCBI) 150946
Atlas_Id 63701
Location 2p23.3  [Link to chromosome band 2p23]
Location_base_pair Starts at 26395960 and ends at 26412532 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GAREML   27172
Cards
Entrez_Gene (NCBI)GAREML  150946  GRB2 associated, regulator of MAPK1-like
AliasesFAM59B
GeneCards (Weizmann)GAREML
Ensembl hg19 (Hinxton)ENSG00000157833 [Gene_View]  chr2:26395960-26412532 [Contig_View]  GAREML [Vega]
Ensembl hg38 (Hinxton)ENSG00000157833 [Gene_View]  chr2:26395960-26412532 [Contig_View]  GAREML [Vega]
ICGC DataPortalENSG00000157833
TCGA cBioPortalGAREML
AceView (NCBI)GAREML
Genatlas (Paris)GAREML
WikiGenes150946
SOURCE (Princeton)GAREML
Genetics Home Reference (NIH)GAREML
Genomic and cartography
GoldenPath hg19 (UCSC)GAREML  -     chr2:26395960-26412532 +  2p23.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)GAREML  -     2p23.3   [Description]    (hg38-Dec_2013)
EnsemblGAREML - 2p23.3 [CytoView hg19]  GAREML - 2p23.3 [CytoView hg38]
Mapping of homologs : NCBIGAREML [Mapview hg19]  GAREML [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA736392 AB015349 AB124552 AK090454 CX759737
RefSeq transcript (Entrez)NM_001168241 NM_001191033
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_022184 NW_004929300
Consensus coding sequences : CCDS (NCBI)GAREML
Cluster EST : UnigeneHs.187912 [ NCBI ]
CGAP (NCI)Hs.187912
Alternative Splicing GalleryENSG00000157833
Gene ExpressionGAREML [ NCBI-GEO ]   GAREML [ EBI - ARRAY_EXPRESS ]   GAREML [ SEEK ]   GAREML [ MEM ]
Gene Expression Viewer (FireBrowse)GAREML [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)150946
GTEX Portal (Tissue expression)GAREML
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ75VX8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ75VX8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ75VX8
Splice isoforms : SwissVarQ75VX8
PhosPhoSitePlusQ75VX8
Domains : Interpro (EBI)CABIT_dom    SAM/pointed   
Domain families : Pfam (Sanger)CABIT (PF12736)   
Domain families : Pfam (NCBI)pfam12736   
Conserved Domain (NCBI)GAREML
DMDM Disease mutations150946
Blocks (Seattle)GAREML
SuperfamilyQ75VX8
Human Protein AtlasENSG00000157833
Peptide AtlasQ75VX8
IPIIPI00302557   IPI01009275   IPI00742896   
Protein Interaction databases
DIP (DOE-UCLA)Q75VX8
IntAct (EBI)Q75VX8
FunCoupENSG00000157833
BioGRIDGAREML
STRING (EMBL)GAREML
ZODIACGAREML
Ontologies - Pathways
QuickGOQ75VX8
Ontology : AmiGOextracellular exosome  
Ontology : EGO-EBIextracellular exosome  
NDEx NetworkGAREML
Atlas of Cancer Signalling NetworkGAREML
Wikipedia pathwaysGAREML
Orthology - Evolution
OrthoDB150946
GeneTree (enSembl)ENSG00000157833
Phylogenetic Trees/Animal Genes : TreeFamGAREML
HOVERGENQ75VX8
HOGENOMQ75VX8
Homologs : HomoloGeneGAREML
Homology/Alignments : Family Browser (UCSC)GAREML
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGAREML [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GAREML
dbVarGAREML
ClinVarGAREML
1000_GenomesGAREML 
Exome Variant ServerGAREML
ExAC (Exome Aggregation Consortium)GAREML (select the gene name)
Genetic variants : HAPMAP150946
Genomic Variants (DGV)GAREML [DGVbeta]
DECIPHER (Syndromes)2:26395960-26412532  ENSG00000157833
CONAN: Copy Number AnalysisGAREML 
Mutations
ICGC Data PortalGAREML 
TCGA Data PortalGAREML 
Broad Tumor PortalGAREML
OASIS PortalGAREML [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDGAREML
BioMutasearch GAREML
DgiDB (Drug Gene Interaction Database)GAREML
DoCM (Curated mutations)GAREML (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GAREML (select a term)
intoGenGAREML
Cancer3DGAREML(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGAREML
Genetic Testing Registry GAREML
NextProtQ75VX8 [Medical]
TSGene150946
GENETestsGAREML
Huge Navigator GAREML [HugePedia]
snp3D : Map Gene to Disease150946
BioCentury BCIQGAREML
ClinGenGAREML
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD150946
Chemical/Pharm GKB GenePA142671865
Clinical trialGAREML
Miscellaneous
canSAR (ICR)GAREML (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGAREML
EVEXGAREML
GoPubMedGAREML
iHOPGAREML
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:05:48 CET 2017

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