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GAS5-AS1 (GAS5 antisense RNA 1)

Identity

Alias_namesGAS5 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) GAS5-AS1
LocusID (NCBI) 100506046
Atlas_Id 63707
Location 1q25.1  [Link to chromosome band 1q25]
Location_base_pair Starts at 173832386 and ends at 173833079 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GAS5-AS1   44119
Cards
Entrez_Gene (NCBI)GAS5-AS1  100506046  GAS5 antisense RNA 1
Aliases
GeneCards (Weizmann)GAS5-AS1
Ensembl hg19 (Hinxton)ENSG00000270084 [Gene_View]  chr1:173832386-173833079 [Contig_View]  GAS5-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000270084 [Gene_View]  chr1:173832386-173833079 [Contig_View]  GAS5-AS1 [Vega]
ICGC DataPortalENSG00000270084
TCGA cBioPortalGAS5-AS1
AceView (NCBI)GAS5-AS1
Genatlas (Paris)GAS5-AS1
WikiGenes100506046
SOURCE (Princeton)GAS5-AS1
Genetics Home Reference (NIH)GAS5-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)GAS5-AS1  -     chr1:173832386-173833079 +  1q25.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)GAS5-AS1  -     1q25.1   [Description]    (hg38-Dec_2013)
EnsemblGAS5-AS1 - 1q25.1 [CytoView hg19]  GAS5-AS1 - 1q25.1 [CytoView hg38]
Mapping of homologs : NCBIGAS5-AS1 [Mapview hg19]  GAS5-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF088026 HG492935
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)GAS5-AS1
Cluster EST : UnigeneHs.656411 [ NCBI ]
CGAP (NCI)Hs.656411
Alternative Splicing GalleryENSG00000270084
Gene ExpressionGAS5-AS1 [ NCBI-GEO ]   GAS5-AS1 [ EBI - ARRAY_EXPRESS ]   GAS5-AS1 [ SEEK ]   GAS5-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)GAS5-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506046
GTEX Portal (Tissue expression)GAS5-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GAS5-AS1
DMDM Disease mutations100506046
Blocks (Seattle)GAS5-AS1
Human Protein AtlasENSG00000270084
Protein Interaction databases
FunCoupENSG00000270084
BioGRIDGAS5-AS1
STRING (EMBL)GAS5-AS1
ZODIACGAS5-AS1
Ontologies - Pathways
Huge Navigator GAS5-AS1 [HugePedia]
snp3D : Map Gene to Disease100506046
BioCentury BCIQGAS5-AS1
ClinGenGAS5-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506046
Clinical trialGAS5-AS1
Miscellaneous
canSAR (ICR)GAS5-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineGAS5-AS1
EVEXGAS5-AS1
GoPubMedGAS5-AS1
iHOPGAS5-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:05:50 CET 2017

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