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GATA3-AS1 (GATA3 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) GATA3-AS1
LocusID (NCBI) 399717
Atlas_Id 63711
Location 10p14  [Link to chromosome band 10p14]
Location_base_pair Starts at 8092413 and ends at 8095447 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GATA3-AS1   33786
Cards
Entrez_Gene (NCBI)GATA3-AS1  399717  GATA3 antisense RNA 1
Aliases
GeneCards (Weizmann)GATA3-AS1
Ensembl hg19 (Hinxton)ENSG00000197308 [Gene_View]  chr10:8092413-8095447 [Contig_View]  GATA3-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000197308 [Gene_View]  chr10:8092413-8095447 [Contig_View]  GATA3-AS1 [Vega]
ICGC DataPortalENSG00000197308
TCGA cBioPortalGATA3-AS1
AceView (NCBI)GATA3-AS1
Genatlas (Paris)GATA3-AS1
WikiGenes399717
SOURCE (Princeton)GATA3-AS1
Genetics Home Reference (NIH)GATA3-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)GATA3-AS1  -     chr10:8092413-8095447 -  10p14   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)GATA3-AS1  -     10p14   [Description]    (hg38-Dec_2013)
EnsemblGATA3-AS1 - 10p14 [CytoView hg19]  GATA3-AS1 - 10p14 [CytoView hg38]
Mapping of homologs : NCBIGATA3-AS1 [Mapview hg19]  GATA3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128810 AW611680 BC036297 BC128075 BC128097
RefSeq transcript (Entrez)NM_207423
RefSeq genomic (Entrez)NC_000010 NC_018921 NG_015859 NT_008705 NW_004929370
Consensus coding sequences : CCDS (NCBI)GATA3-AS1
Cluster EST : UnigeneHs.669736 [ NCBI ]
CGAP (NCI)Hs.669736
Alternative Splicing GalleryENSG00000197308
Gene ExpressionGATA3-AS1 [ NCBI-GEO ]   GATA3-AS1 [ EBI - ARRAY_EXPRESS ]   GATA3-AS1 [ SEEK ]   GATA3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)GATA3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)399717
GTEX Portal (Tissue expression)GATA3-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GATA3-AS1
DMDM Disease mutations399717
Blocks (Seattle)GATA3-AS1
Human Protein AtlasENSG00000197308
HPRD13518
IPIIPI00410497   IPI00980535   
Protein Interaction databases
FunCoupENSG00000197308
BioGRIDGATA3-AS1
STRING (EMBL)GATA3-AS1
ZODIACGATA3-AS1
Ontologies - Pathways
Huge Navigator GATA3-AS1 [HugePedia]
snp3D : Map Gene to Disease399717
BioCentury BCIQGATA3-AS1
ClinGenGATA3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD399717
Clinical trialGATA3-AS1
Miscellaneous
canSAR (ICR)GATA3-AS1 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGATA3-AS1
EVEXGATA3-AS1
GoPubMedGATA3-AS1
iHOPGATA3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:05:51 CET 2017

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