GATA3 (GATA binding protein 3)

Identity

Other names	HDR
	MGC2346
	MGC5199
	MGC5445
HGNC	GATA3
Location	10p15
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	GATA3   4172
Entrez_Gene	GATA3  2625  GATA binding protein 3
	Cards
GeneCards	GATA3
Ensembl	GATA3 [Search_View]   ENSG00000107485 [Gene_View]
Genatlas	GATA3
GeneLynx	GATA3
eGenome	GATA3
euGene	2625
	Genomic and cartography
GoldenPath	GATA3  -  10p15   chr10:8136673-8157170 +  10p14   [Description]    (hg18-March_2006)
Ensembl	GATA3 - 10p14 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	GATA3
	Gene and transcription
Genbank	AI024501 [ ENTREZ ]
Genbank	AI686327 [ ENTREZ ]
Genbank	AM392571 [ ENTREZ ]
Genbank	AM392688 [ ENTREZ ]
Genbank	BC003070 [ ENTREZ ]
RefSeq	NM_001002295 [ SRS ]    NM_001002295 [ ENTREZ ]
RefSeq	NM_002051 [ SRS ]    NM_002051 [ ENTREZ ]
RefSeq	AC_000053 [ SRS ]    AC_000053 [ ENTREZ ]
RefSeq	AC_000142 [ SRS ]    AC_000142 [ ENTREZ ]
RefSeq	NC_000010 [ SRS ]    NC_000010 [ ENTREZ ]
RefSeq	NT_077569 [ SRS ]    NT_077569 [ ENTREZ ]
RefSeq	NW_001837931 [ SRS ]    NW_001837931 [ ENTREZ ]
RefSeq	NW_924584 [ SRS ]    NW_924584 [ ENTREZ ]
AceView	GATA3 AceView - NCBI
Unigene	Hs.524134 [ SRS ]    Hs.524134 [ NCBI ]     HS524134 [ spliceNest ]
Fast-db	2299 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P23771 [ SRS]    P23771 [ EXPASY ]     P23771 [ INTERPRO ]     P23771 [ UNIPROT ]
Prosite	PS00344 GATA_ZN_FINGER_1 [ SRS ]    PS00344 GATA_ZN_FINGER_1 [ Expasy ]
Prosite	PS50114 GATA_ZN_FINGER_2 [ SRS ]    PS50114 GATA_ZN_FINGER_2 [ Expasy ]
Interpro	IPR016374 TF_GATA-1/2/3 [ SRS ]    IPR016374 TF_GATA-1/2/3 [ EBI ]
Interpro	IPR000679 Znf_GATA [ SRS ]    IPR000679 Znf_GATA [ EBI ]
Interpro	IPR013088 Znf_NHR/GATA [ SRS ]    IPR013088 Znf_NHR/GATA [ EBI ]
CluSTr	P23771
Pfam	PF00320 GATA [ SRS ]    PF00320 GATA [ Sanger ]    pfam00320 [ NCBI-CDD ]
Smart	SM00401 ZnF_GATA [EMBL]
Blocks	P23771
HPRD	00572
	Protein Interaction databases
DIP	P23771
IntAct	P23771
	Polymorphism : SNP, mutations, diseases
OMIM	131320;146255    [ map ]
GENECLINICS	131320;146255
SNP	GATA3 [dbSNP-NCBI]
SNP	NM_001002295 [SNP-NCI]
SNP	NM_002051 [SNP-NCI]
SNP	GATA3 [GeneSNPs - Utah]  GATA3] [HGBASE - SRS]
HAPMAP	GATA3 [HAPMAP]
COSMIC	GATA3 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	GATA3
	General knowledge
Family Browser	GATA3 [UCSC Family Browser]
SOURCE	NM_001002295
SOURCE	NM_002051
SMD	Hs.524134
SAGE	Hs.524134
GO	cell fate determination [Amigo]  cell fate determination
GO	transcription factor activity [Amigo]  transcription factor activity
GO	nucleus [Amigo]  nucleus
GO	transcription [Amigo]  transcription
GO	transcription from RNA polymerase II promoter [Amigo]  transcription from RNA polymerase II promoter
GO	defense response [Amigo]  defense response
GO	sensory perception of sound [Amigo]  sensory perception of sound
GO	transcription factor binding [Amigo]  transcription factor binding
GO	zinc ion binding [Amigo]  zinc ion binding
GO	anatomical structure morphogenesis [Amigo]  anatomical structure morphogenesis
GO	transcription activator activity [Amigo]  transcription activator activity
GO	regulation of cytokine biosynthetic process [Amigo]  regulation of cytokine biosynthetic process
GO	norepinephrine biosynthetic process [Amigo]  norepinephrine biosynthetic process
GO	sequence-specific DNA binding [Amigo]  sequence-specific DNA binding
GO	response to estrogen stimulus [Amigo]  response to estrogen stimulus
GO	positive regulation of transcription, DNA-dependent [Amigo]  positive regulation of transcription, DNA-dependent
GO	metal ion binding [Amigo]  metal ion binding
GO	sympathetic nervous system development [Amigo]  sympathetic nervous system development
BIOCARTA	GATA3 participate in activating the Th2 cytokine genes expression    [Genes]
PubGene	GATA3
TreeFam	GATA3
CTD	2625 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	GATA3 Related clones (RZPD - Berlin)
	PubMed
PubMed	68 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:12:16 2008