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GATD3B (glutamine amidotransferase like class 1 domain containing 3B)

Identity

Other aliasKNP-I
HGNC (Hugo) GATD3B
LocusID (NCBI) 102724023
Atlas_Id 80374
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 44133683 and ends at 44145723 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)GATD3B   53816
Cards
Entrez_Gene (NCBI)GATD3B  102724023  glutamine amidotransferase like class 1 domain containing 3B
AliasesKNP-I
GeneCards (Weizmann)GATD3B
Ensembl hg19 (Hinxton)ENSG00000280071 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000280071 [Gene_View]  ENSG00000280071 [Sequence]  chr21:44133683-44145723 [Contig_View]  GATD3B [Vega]
ICGC DataPortalENSG00000280071
TCGA cBioPortalGATD3B
AceView (NCBI)GATD3B
Genatlas (Paris)GATD3B
WikiGenes102724023
SOURCE (Princeton)GATD3B
Genetics Home Reference (NIH)GATD3B
Genomic and cartography
GoldenPath hg38 (UCSC)GATD3B  -     chr21:44133683-44145723 +  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GATD3B  -     21q22.3   [Description]    (hg19-Feb_2009)
GoldenPathGATD3B - 21q22.3 [CytoView hg19]  GATD3B - 21q22.3 [CytoView hg38]
ImmunoBaseENSG00000280071
Mapping of homologs : NCBIGATD3B [Mapview hg19]  GATD3B [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC002370 BC003587 BE297974 BX353477 CN291933
RefSeq transcript (Entrez)NM_001363758 NM_001363760 NM_001363761
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GATD3B
Cluster EST : UnigeneHs.413482 [ NCBI ]
CGAP (NCI)Hs.413482
Alternative Splicing GalleryENSG00000280071
Gene ExpressionGATD3B [ NCBI-GEO ]   GATD3B [ EBI - ARRAY_EXPRESS ]   GATD3B [ SEEK ]   GATD3B [ MEM ]
Gene Expression Viewer (FireBrowse)GATD3B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102724023
GTEX Portal (Tissue expression)GATD3B
Human Protein AtlasENSG00000280071-GATD3B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GATD3B
DMDM Disease mutations102724023
Blocks (Seattle)GATD3B
Human Protein Atlas [tissue]ENSG00000280071-GATD3B [tissue]
Protein Interaction databases
FunCoupENSG00000280071
BioGRIDGATD3B
STRING (EMBL)GATD3B
ZODIACGATD3B
Ontologies - Pathways
Huge Navigator GATD3B [HugePedia]
snp3D : Map Gene to Disease102724023
BioCentury BCIQGATD3B
ClinGenGATD3B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102724023
Clinical trialGATD3B
Miscellaneous
canSAR (ICR)GATD3B (select the gene name)
DataMed IndexGATD3B
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGATD3B
EVEXGATD3B
GoPubMedGATD3B
iHOPGATD3B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 15:29:29 CEST 2019

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