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GCC2-AS1 (GCC2 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) GCC2-AS1
LocusID (NCBI) 644903
Atlas_Id 77713
Location 2q12.3  [Link to chromosome band 2q12]
Location_base_pair Starts at 108509755 and ends at 108534219 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GCC2-AS1   28126
Cards
Entrez_Gene (NCBI)GCC2-AS1  644903  GCC2 antisense RNA 1
Aliases
GeneCards (Weizmann)GCC2-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:108509755-108534219 [Contig_View]  GCC2-AS1 [Vega]
TCGA cBioPortalGCC2-AS1
AceView (NCBI)GCC2-AS1
Genatlas (Paris)GCC2-AS1
WikiGenes644903
SOURCE (Princeton)GCC2-AS1
Genetics Home Reference (NIH)GCC2-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)GCC2-AS1  -     chr2:108509755-108534219 -  2q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GCC2-AS1  -     2q12.3   [Description]    (hg19-Feb_2009)
EnsemblGCC2-AS1 - 2q12.3 [CytoView hg19]  GCC2-AS1 - 2q12.3 [CytoView hg38]
Mapping of homologs : NCBIGCC2-AS1 [Mapview hg19]  GCC2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095987 BC004487
RefSeq transcript (Entrez)NM_001039776 NM_032658
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GCC2-AS1
Gene ExpressionGCC2-AS1 [ NCBI-GEO ]   GCC2-AS1 [ EBI - ARRAY_EXPRESS ]   GCC2-AS1 [ SEEK ]   GCC2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)GCC2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)644903
GTEX Portal (Tissue expression)GCC2-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GCC2-AS1
DMDM Disease mutations644903
Blocks (Seattle)GCC2-AS1
IPIIPI00013355   
Protein Interaction databases
BioGRIDGCC2-AS1
STRING (EMBL)GCC2-AS1
ZODIACGCC2-AS1
Ontologies - Pathways
Huge Navigator GCC2-AS1 [HugePedia]
snp3D : Map Gene to Disease644903
BioCentury BCIQGCC2-AS1
ClinGenGCC2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD644903
Clinical trialGCC2-AS1
Miscellaneous
canSAR (ICR)GCC2-AS1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGCC2-AS1
EVEXGCC2-AS1
GoPubMedGCC2-AS1
iHOPGCC2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:48:50 CET 2017

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