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GCRG224 (gastric cancer-related gene GCRG224)

Identity

Other aliasGCRG-P224
HGNC (Hugo) -
LocusID (NCBI) 360219
Atlas_Id 46520
Location 11q14.1  [Link to chromosome band 11q14]
Location_base_pair Starts at 82822367 and ends at 82823517 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)GCRG224  360219  gastric cancer-related gene GCRG224
AliasesGCRG-P224
GeneCards (Weizmann)GCRG224
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:82822367-82823517 [Contig_View]  GCRG224 [Vega]
TCGA cBioPortalGCRG224
AceView (NCBI)GCRG224
Genatlas (Paris)GCRG224
WikiGenes360219
SOURCE (Princeton)GCRG224
Genetics Home Reference (NIH)GCRG224
Genomic and cartography
GoldenPath hg38 (UCSC)GCRG224  -     chr11:82822367-82823517 +  11q14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GCRG224  -     11q14.1   [Description]    (hg19-Feb_2009)
EnsemblGCRG224 - 11q14.1 [CytoView hg19]  GCRG224 - 11q14.1 [CytoView hg38]
Mapping of homologs : NCBIGCRG224 [Mapview hg19]  GCRG224 [Mapview hg38]
OMIM610888   
Gene and transcription
Genbank (Entrez)AF438406
RefSeq transcript (Entrez)NM_182956
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GCRG224
Cluster EST : UnigeneHs.733148 [ NCBI ]
CGAP (NCI)Hs.733148
Gene ExpressionGCRG224 [ NCBI-GEO ]   GCRG224 [ EBI - ARRAY_EXPRESS ]   GCRG224 [ SEEK ]   GCRG224 [ MEM ]
Gene Expression Viewer (FireBrowse)GCRG224 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)360219
GTEX Portal (Tissue expression)GCRG224
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WZA8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WZA8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WZA8
Splice isoforms : SwissVarQ8WZA8
PhosPhoSitePlusQ8WZA8
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GCRG224
DMDM Disease mutations360219
Blocks (Seattle)GCRG224
SuperfamilyQ8WZA8
Peptide AtlasQ8WZA8
IPIIPI00103924   
Protein Interaction databases
DIP (DOE-UCLA)Q8WZA8
IntAct (EBI)Q8WZA8
BioGRIDGCRG224
STRING (EMBL)GCRG224
ZODIACGCRG224
Ontologies - Pathways
QuickGOQ8WZA8
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkGCRG224
Atlas of Cancer Signalling NetworkGCRG224
Wikipedia pathwaysGCRG224
Orthology - Evolution
OrthoDB360219
Phylogenetic Trees/Animal Genes : TreeFam-
HOVERGENQ8WZA8
HOGENOMQ8WZA8
Homologs : HomoloGeneGCRG224
Homology/Alignments : Family Browser (UCSC)GCRG224
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGCRG224 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GCRG224
dbVarGCRG224
ClinVarGCRG224
1000_GenomesGCRG224 
Exome Variant ServerGCRG224
ExAC (Exome Aggregation Consortium)GCRG224 (select the gene name)
Genetic variants : HAPMAP360219
Genomic Variants (DGV)GCRG224 [DGVbeta]
DECIPHERGCRG224 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGCRG224 
Mutations
ICGC Data Portal- 
TCGA Data Portal- 
Broad Tumor Portal-
OASIS Portal- [ Somatic mutations - Copy number]
Mutations and Diseases : HGMD-
BioMutasearch GCRG224
DgiDB (Drug Gene Interaction Database)GCRG224
DoCM (Curated mutations)GCRG224 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GCRG224 (select a term)
intoGenGCRG224
Cancer3DGCRG224(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610888   
Orphanet
MedgenGCRG224
Genetic Testing Registry GCRG224
NextProtQ8WZA8 [Medical]
TSGene360219
GENETestsGCRG224
Target ValidationGCRG224
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease360219
BioCentury BCIQGCRG224
ClinGenGCRG224
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD360219
Clinical trialGCRG224
Miscellaneous
canSAR (ICR)GCRG224 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGCRG224
EVEXGCRG224
GoPubMedGCRG224
iHOPGCRG224
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:35:00 CEST 2017

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