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GDNF-AS1 (GDNF antisense RNA 1 (head to head))

Identity

Alias_namesGDNF antisense RNA 1 (non-protein coding)
GDNF antisense RNA 1
Alias_symbol (synonym)GDNFOS
Other alias
HGNC (Hugo) GDNF-AS1
LocusID (NCBI) 100861519
Atlas_Id 63745
Location 5p13.2  [Link to chromosome band 5p13]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GDNF-AS1   43592
Cards
Entrez_Gene (NCBI)GDNF-AS1  100861519  GDNF antisense RNA 1 (head to head)
AliasesGDNFOS
GeneCards (Weizmann)GDNF-AS1
Ensembl hg19 (Hinxton)ENSG00000248587 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248587 [Gene_View]  - [Contig_View]  GDNF-AS1 [Vega]
ICGC DataPortalENSG00000248587
TCGA cBioPortalGDNF-AS1
AceView (NCBI)GDNF-AS1
Genatlas (Paris)GDNF-AS1
WikiGenes100861519
SOURCE (Princeton)GDNF-AS1
Genetics Home Reference (NIH)GDNF-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)GDNF-AS1  -  
GoldenPath hg19 (UCSC)GDNF-AS1  -  
EnsemblGDNF-AS1 - [CytoView hg19]  GDNF-AS1 - [CytoView hg38]
Mapping of homologs : NCBIGDNF-AS1 [Mapview hg19]  GDNF-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA359107 HY152702 JF824129 JF824130 JF824131
RefSeq transcript (Entrez)NM_001278094
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GDNF-AS1
Cluster EST : UnigeneHs.536820 [ NCBI ]
CGAP (NCI)Hs.536820
Alternative Splicing GalleryENSG00000248587
Gene ExpressionGDNF-AS1 [ NCBI-GEO ]   GDNF-AS1 [ EBI - ARRAY_EXPRESS ]   GDNF-AS1 [ SEEK ]   GDNF-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)GDNF-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100861519
GTEX Portal (Tissue expression)GDNF-AS1
Human Protein AtlasENSG00000248587-GDNF-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GDNF-AS1
DMDM Disease mutations100861519
Blocks (Seattle)GDNF-AS1
Human Protein Atlas [tissue]ENSG00000248587-GDNF-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000248587
BioGRIDGDNF-AS1
STRING (EMBL)GDNF-AS1
ZODIACGDNF-AS1
Ontologies - Pathways
Huge Navigator GDNF-AS1 [HugePedia]
snp3D : Map Gene to Disease100861519
BioCentury BCIQGDNF-AS1
ClinGenGDNF-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100861519
Clinical trialGDNF-AS1
Miscellaneous
canSAR (ICR)GDNF-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGDNF-AS1
EVEXGDNF-AS1
GoPubMedGDNF-AS1
iHOPGDNF-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:48:53 CET 2017

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