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GEM (GTP binding protein overexpressed in skeletal muscle)

Identity

Other namesKIR
HGNC (Hugo) GEM
LocusID (NCBI) 2669
Location 8q22.1
Location_base_pair Starts at 95261485 and ends at 95274547 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)GEM   4234
Cards
Entrez_Gene (NCBI)GEM  2669  GTP binding protein overexpressed in skeletal muscle
GeneCards (Weizmann)GEM
Ensembl (Hinxton)ENSG00000164949 [Gene_View]  chr8:95261485-95274547 [Contig_View]  GEM [Vega]
ICGC DataPortalENSG00000164949
AceView (NCBI)GEM
Genatlas (Paris)GEM
WikiGenes2669
SOURCE (Princeton)NM_005261 NM_181702
Genomic and cartography
GoldenPath (UCSC)GEM  -  8q22.1   chr8:95261485-95274547 -  8q22.1   [Description]    (hg19-Feb_2009)
EnsemblGEM - 8q22.1 [CytoView]
Mapping of homologs : NCBIGEM [Mapview]
OMIM600164   
Gene and transcription
Genbank (Entrez)AK314017 BC022010 BI759640 DB018783 DQ890821
RefSeq transcript (Entrez)NM_005261 NM_181702
RefSeq genomic (Entrez)AC_000140 NC_000008 NC_018919 NT_008046 NW_001839136 NW_004929340
Consensus coding sequences : CCDS (NCBI)GEM
Cluster EST : UnigeneHs.654463 [ NCBI ]
CGAP (NCI)Hs.654463
Alternative Splicing : Fast-db (Paris)GSHG0029720
Alternative Splicing GalleryENSG00000164949
Gene ExpressionGEM [ NCBI-GEO ]     GEM [ SEEK ]   GEM [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP55040 (Uniprot)
NextProtP55040  [Medical]
With graphics : InterProP55040
Splice isoforms : SwissVarP55040 (Swissvar)
Domaine pattern : Prosite (Expaxy)RAS (PS51421)   
Domains : Interpro (EBI)P-loop_NTPase    Small_GTP-bd_dom    Small_GTPase    Small_GTPase_GEM/REM/Rad    Small_GTPase_Ras   
Related proteins : CluSTrP55040
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
DMDM Disease mutations2669
Blocks (Seattle)P55040
PDB (SRS)2CJW    2G3Y    2HT6   
PDB (PDBSum)2CJW    2G3Y    2HT6   
PDB (IMB)2CJW    2G3Y    2HT6   
PDB (RSDB)2CJW    2G3Y    2HT6   
Human Protein AtlasENSG00000164949
Peptide AtlasP55040
HPRD11553
IPIIPI00022710   IPI01014796   
Protein Interaction databases
DIP (DOE-UCLA)P55040
IntAct (EBI)P55040
FunCoupENSG00000164949
BioGRIDGEM
IntegromeDBGEM
STRING (EMBL)GEM
Ontologies - Pathways
QuickGOP55040
Ontology : AmiGOmagnesium ion binding  GTPase activity  protein binding  calmodulin binding  GTP binding  nucleus  GTP catabolic process  immune response  mitotic nuclear division  signal transduction  cell surface receptor signaling pathway  small GTPase mediated signal transduction  cytoplasmic side of plasma membrane  GDP binding  midbody  spindle midzone  chromosome organization  metaphase plate congression  mitotic spindle  
Ontology : EGO-EBImagnesium ion binding  GTPase activity  protein binding  calmodulin binding  GTP binding  nucleus  GTP catabolic process  immune response  mitotic nuclear division  signal transduction  cell surface receptor signaling pathway  small GTPase mediated signal transduction  cytoplasmic side of plasma membrane  GDP binding  midbody  spindle midzone  chromosome organization  metaphase plate congression  mitotic spindle  
Protein Interaction DatabaseGEM
Wikipedia pathwaysGEM
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)GEM
SNP (GeneSNP Utah)GEM
SNP : HGBaseGEM
Genetic variants : HAPMAPGEM
1000_GenomesGEM 
ICGC programENSG00000164949 
CONAN: Copy Number AnalysisGEM 
Somatic Mutations in Cancer : COSMICGEM 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
DECIPHER (Syndromes)8:95261485-95274547
Mutations and Diseases : HGMDGEM
OMIM600164   
MedgenGEM
GENETestsGEM
Disease Genetic AssociationGEM
Huge Navigator GEM [HugePedia]  GEM [HugeCancerGEM]
Genomic VariantsGEM  GEM [DGVbeta]
Exome VariantGEM
dbVarGEM
ClinVarGEM
snp3D : Map Gene to Disease2669
General knowledge
Homologs : HomoloGeneGEM
Homology/Alignments : Family Browser (UCSC)GEM
Phylogenetic Trees/Animal Genes : TreeFamGEM
Chemical/Protein Interactions : CTD2669
Chemical/Pharm GKB GenePA28645
Clinical trialGEM
Cancer Resource (Charite)ENSG00000164949
Other databases
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
CoreMineGEM
GoPubMedGEM
iHOPGEM
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Nov 8 17:27:26 CET 2014

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