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GEMIN8 (gem (nuclear organelle) associated protein 8)

Identity

Alias_namesFAM51A1
family with sequence similarity 51, member A1
gem (nuclear organelle) associated protein 8
Alias_symbol (synonym)FLJ20514
Other alias
HGNC (Hugo) GEMIN8
LocusID (NCBI) 54960
Atlas_Id 63751
Location Xp22.2  [Link to chromosome band Xp22]
Location_base_pair Starts at 14024845 and ends at 14048035 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GEMIN8   26044
Cards
Entrez_Gene (NCBI)GEMIN8  54960  gem (nuclear organelle) associated protein 8
AliasesFAM51A1
GeneCards (Weizmann)GEMIN8
Ensembl hg19 (Hinxton) [Gene_View]  chrX:14024845-14048035 [Contig_View]  GEMIN8 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:14024845-14048035 [Contig_View]  GEMIN8 [Vega]
TCGA cBioPortalGEMIN8
AceView (NCBI)GEMIN8
Genatlas (Paris)GEMIN8
WikiGenes54960
SOURCE (Princeton)GEMIN8
Genetics Home Reference (NIH)GEMIN8
Genomic and cartography
GoldenPath hg19 (UCSC)GEMIN8  -     chrX:14024845-14048035 -  Xp22.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)GEMIN8  -     Xp22.2   [Description]    (hg38-Dec_2013)
EnsemblGEMIN8 - Xp22.2 [CytoView hg19]  GEMIN8 - Xp22.2 [CytoView hg38]
Mapping of homologs : NCBIGEMIN8 [Mapview hg19]  GEMIN8 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK000521 AK095002 AK125062 BC003607 BC014324
RefSeq transcript (Entrez)NM_001042479 NM_001042480 NM_017856
RefSeq genomic (Entrez)NC_000023 NC_018934 NG_021285 NT_167197 NW_004929438
Consensus coding sequences : CCDS (NCBI)GEMIN8
Cluster EST : UnigeneHs.592237 [ NCBI ]
CGAP (NCI)Hs.592237
Gene ExpressionGEMIN8 [ NCBI-GEO ]   GEMIN8 [ EBI - ARRAY_EXPRESS ]   GEMIN8 [ SEEK ]   GEMIN8 [ MEM ]
Gene Expression Viewer (FireBrowse)GEMIN8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54960
GTEX Portal (Tissue expression)GEMIN8
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NWZ8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NWZ8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NWZ8
Splice isoforms : SwissVarQ9NWZ8
PhosPhoSitePlusQ9NWZ8
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GEMIN8
DMDM Disease mutations54960
Blocks (Seattle)GEMIN8
SuperfamilyQ9NWZ8
Peptide AtlasQ9NWZ8
HPRD06533
IPIIPI00844046   IPI00640724   
Protein Interaction databases
DIP (DOE-UCLA)Q9NWZ8
IntAct (EBI)Q9NWZ8
BioGRIDGEMIN8
STRING (EMBL)GEMIN8
ZODIACGEMIN8
Ontologies - Pathways
QuickGOQ9NWZ8
Ontology : AmiGOspliceosomal snRNP assembly  protein binding  nucleus  nucleoplasm  cytoplasm  cytosol  SMN complex  SMN-Sm protein complex  Gemini of coiled bodies  
Ontology : EGO-EBIspliceosomal snRNP assembly  protein binding  nucleus  nucleoplasm  cytoplasm  cytosol  SMN complex  SMN-Sm protein complex  Gemini of coiled bodies  
Pathways : KEGGRNA transport   
NDEx NetworkGEMIN8
Atlas of Cancer Signalling NetworkGEMIN8
Wikipedia pathwaysGEMIN8
Orthology - Evolution
OrthoDB54960
Phylogenetic Trees/Animal Genes : TreeFamGEMIN8
HOVERGENQ9NWZ8
HOGENOMQ9NWZ8
Homologs : HomoloGeneGEMIN8
Homology/Alignments : Family Browser (UCSC)GEMIN8
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGEMIN8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GEMIN8
dbVarGEMIN8
ClinVarGEMIN8
1000_GenomesGEMIN8 
Exome Variant ServerGEMIN8
ExAC (Exome Aggregation Consortium)GEMIN8 (select the gene name)
Genetic variants : HAPMAP54960
Genomic Variants (DGV)GEMIN8 [DGVbeta]
DECIPHER (Syndromes)X:14024845-14048035  
CONAN: Copy Number AnalysisGEMIN8 
Mutations
ICGC Data PortalGEMIN8 
TCGA Data PortalGEMIN8 
Broad Tumor PortalGEMIN8
OASIS PortalGEMIN8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGEMIN8  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGEMIN8
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch GEMIN8
DgiDB (Drug Gene Interaction Database)GEMIN8
DoCM (Curated mutations)GEMIN8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GEMIN8 (select a term)
intoGenGEMIN8
Cancer3DGEMIN8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGEMIN8
Genetic Testing Registry GEMIN8
NextProtQ9NWZ8 [Medical]
TSGene54960
GENETestsGEMIN8
Huge Navigator GEMIN8 [HugePedia]
snp3D : Map Gene to Disease54960
BioCentury BCIQGEMIN8
ClinGenGEMIN8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54960
Chemical/Pharm GKB GenePA162389344
Clinical trialGEMIN8
Miscellaneous
canSAR (ICR)GEMIN8 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGEMIN8
EVEXGEMIN8
GoPubMedGEMIN8
iHOPGEMIN8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:05:59 CET 2017

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