GEN1 (Gen homolog 1, endonuclease (Drosophila))

Identity

Other names	DKFZp781F0986
	FLJ40869
	Gen
HGNC	GEN1
Location	2p24.2
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	GEN1   26881
Entrez_Gene	GEN1  348654  Gen homolog 1, endonuclease (Drosophila)
	Cards
GeneCards	GEN1
Ensembl	GEN1 [Search_View]   ENSG00000178295 [Gene_View]
Genatlas	GEN1
GeneLynx	GEN1
eGenome	GEN1
euGene	348654
	Genomic and cartography
GoldenPath	GEN1  -  2p24.2   chr2:17798895-17830113 +  2p24.2   [Description]    (hg18-March_2006)
Ensembl	GEN1 - 2p24.2 [CytoView]
NCBI	Mapview
HomoloGene	GEN1
	Gene and transcription
Genbank	AK025489 [ ENTREZ ]
Genbank	AK098188 [ ENTREZ ]
Genbank	AK131387 [ ENTREZ ]
Genbank	BC035863 [ ENTREZ ]
Genbank	BC117204 [ ENTREZ ]
RefSeq	NM_001130009 [ SRS ]    NM_001130009 [ ENTREZ ]
RefSeq	NM_182625 [ SRS ]    NM_182625 [ ENTREZ ]
RefSeq	AC_000045 [ SRS ]    AC_000045 [ ENTREZ ]
RefSeq	AC_000134 [ SRS ]    AC_000134 [ ENTREZ ]
RefSeq	NC_000002 [ SRS ]    NC_000002 [ ENTREZ ]
RefSeq	NT_015926 [ SRS ]    NT_015926 [ ENTREZ ]
RefSeq	NW_001838767 [ SRS ]    NW_001838767 [ ENTREZ ]
RefSeq	NW_927719 [ SRS ]    NW_927719 [ ENTREZ ]
AceView	GEN1 AceView - NCBI
Unigene	Hs.467793 [ SRS ]    Hs.467793 [ NCBI ]     HS467793 [ spliceNest ]
Fast-db	1624 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q17RS7 [ SRS]    Q17RS7 [ EXPASY ]     Q17RS7 [ INTERPRO ]     Q17RS7 [ UNIPROT ]
Prosite	PS00841 XPG_1 [ SRS ]    PS00841 XPG_1 [ Expasy ]
Prosite	PS00842 XPG_2 [ SRS ]    PS00842 XPG_2 [ Expasy ]
Interpro	IPR008918 HhH2 [ SRS ]    IPR008918 HhH2 [ EBI ]
Interpro	IPR006085 XPG_DNA_repair_N [ SRS ]    IPR006085 XPG_DNA_repair_N [ EBI ]
Interpro	IPR006086 XPG_I [ SRS ]    IPR006086 XPG_I [ EBI ]
Interpro	IPR006084 XPGC_Rad_DNA_repair [ SRS ]    IPR006084 XPGC_Rad_DNA_repair [ EBI ]
CluSTr	Q17RS7
Pfam	PF00867 XPG_I [ SRS ]    PF00867 XPG_I [ Sanger ]    pfam00867 [ NCBI-CDD ]
Pfam	PF00752 XPG_N [ SRS ]    PF00752 XPG_N [ Sanger ]    pfam00752 [ NCBI-CDD ]
Smart	SM00279 HhH2 [EMBL]
Smart	SM00484 XPGI [EMBL]
Smart	SM00485 XPGN [EMBL]
Blocks	Q17RS7
HPRD	08813
	Protein Interaction databases
DIP	Q17RS7
IntAct	Q17RS7
	Polymorphism : SNP, mutations, diseases
SNP	GEN1 [dbSNP-NCBI]
SNP	NM_001130009 [SNP-NCI]
SNP	NM_182625 [SNP-NCI]
SNP	GEN1 [GeneSNPs - Utah]  GEN1] [HGBASE - SRS]
HAPMAP	GEN1 [HAPMAP]
COSMIC	GEN1 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	GEN1
	General knowledge
Family Browser	GEN1 [UCSC Family Browser]
SOURCE	NM_001130009
SOURCE	NM_182625
SMD	Hs.467793
SAGE	Hs.467793
GO	magnesium ion binding [Amigo]  magnesium ion binding
GO	DNA binding [Amigo]  DNA binding
GO	endonuclease activity [Amigo]  endonuclease activity
GO	nucleus [Amigo]  nucleus
GO	DNA repair [Amigo]  DNA repair
GO	hydrolase activity [Amigo]  hydrolase activity
PubGene	GEN1
TreeFam	GEN1
CTD	348654 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	GEN1 Related clones (RZPD - Berlin)
	PubMed
PubMed	3 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:12:30 2008