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GET1 (guided entry of tail-anchored proteins factor 1)

Identity

Alias (NCBI)CHD5
WRB
HGNC (Hugo) GET1
HGNC Alias symbCHD5
GET1
LocusID (NCBI) 7485
Atlas_Id 75768
Location 21q22.2  [Link to chromosome band 21q22]
Location_base_pair Starts at 39380326 and ends at 39397889 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
WRB NLKWRB KCNJ15
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

 

Nomenclature
HGNC (Hugo)GET1   12790
LRG (Locus Reference Genomic)LRG_1060
Cards
Entrez_Gene (NCBI)GET1    guided entry of tail-anchored proteins factor 1
AliasesCHD5; WRB
GeneCards (Weizmann)GET1
Ensembl hg19 (Hinxton)ENSG00000182093 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182093 [Gene_View]  ENSG00000182093 [Sequence]  chr21:39380326-39397889 [Contig_View]  GET1 [Vega]
ICGC DataPortalENSG00000182093
TCGA cBioPortalGET1
AceView (NCBI)GET1
Genatlas (Paris)GET1
SOURCE (Princeton)GET1
Genetics Home Reference (NIH)GET1
Genomic and cartography
GoldenPath hg38 (UCSC)GET1  -     chr21:39380326-39397889 +  21q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GET1  -     21q22.2   [Description]    (hg19-Feb_2009)
GoldenPathGET1 - 21q22.2 [CytoView hg19]  GET1 - 21q22.2 [CytoView hg38]
ImmunoBaseENSG00000182093
Genome Data Viewer NCBIGET1 [Mapview hg19]  
OMIM602915   
Gene and transcription
Genbank (Entrez)AK293113 AK293866 AK297186 AK299144 AK299245
RefSeq transcript (Entrez)NM_001146218 NM_001350293 NM_001350294 NM_001350295 NM_001350296 NM_004627
Consensus coding sequences : CCDS (NCBI)GET1
Gene ExpressionGET1 [ NCBI-GEO ]   GET1 [ EBI - ARRAY_EXPRESS ]   GET1 [ SEEK ]   GET1 [ MEM ]
Gene Expression Viewer (FireBrowse)GET1 [ Firebrowse - Broad ]
GenevisibleExpression of GET1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7485
GTEX Portal (Tissue expression)GET1
Human Protein AtlasENSG00000182093-GET1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO00258   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO00258  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO00258
PhosPhoSitePlusO00258
Domains : Interpro (EBI)Get1   
Domain families : Pfam (Sanger)CHD5 (PF04420)   
Domain families : Pfam (NCBI)pfam04420   
Conserved Domain (NCBI)GET1
PDB (RSDB)6SO5   
PDB Europe6SO5   
PDB (PDBSum)6SO5   
PDB (IMB)6SO5   
Structural Biology KnowledgeBase6SO5   
SCOP (Structural Classification of Proteins)6SO5   
CATH (Classification of proteins structures)6SO5   
SuperfamilyO00258
AlphaFold pdb e-kbO00258   
Human Protein Atlas [tissue]ENSG00000182093-GET1 [tissue]
HPRD04224
Protein Interaction databases
DIP (DOE-UCLA)O00258
IntAct (EBI)O00258
BioGRIDGET1
STRING (EMBL)GET1
ZODIACGET1
Ontologies - Pathways
QuickGOO00258
Ontology : AmiGOprotein binding  nucleus  endoplasmic reticulum  endoplasmic reticulum membrane  integral component of membrane  GET complex  GET complex  protein insertion into ER membrane  protein insertion into ER membrane  protein stabilization  tail-anchored membrane protein insertion into ER membrane  tail-anchored membrane protein insertion into ER membrane  tail-anchored membrane protein insertion into ER membrane  
Ontology : EGO-EBIprotein binding  nucleus  endoplasmic reticulum  endoplasmic reticulum membrane  integral component of membrane  GET complex  GET complex  protein insertion into ER membrane  protein insertion into ER membrane  protein stabilization  tail-anchored membrane protein insertion into ER membrane  tail-anchored membrane protein insertion into ER membrane  tail-anchored membrane protein insertion into ER membrane  
NDEx NetworkGET1
Atlas of Cancer Signalling NetworkGET1
Wikipedia pathwaysGET1
Orthology - Evolution
OrthoDB7485
GeneTree (enSembl)ENSG00000182093
Phylogenetic Trees/Animal Genes : TreeFamGET1
Homologs : HomoloGeneGET1
Homology/Alignments : Family Browser (UCSC)GET1
Gene fusions - Rearrangements
Fusion : QuiverGET1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGET1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GET1
dbVarGET1
ClinVarGET1
MonarchGET1
1000_GenomesGET1 
Exome Variant ServerGET1
GNOMAD BrowserENSG00000182093
Varsome BrowserGET1
ACMGGET1 variants
VarityO00258
Genomic Variants (DGV)GET1 [DGVbeta]
DECIPHERGET1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGET1 
Mutations
ICGC Data PortalGET1 
TCGA Data PortalGET1 
Broad Tumor PortalGET1
OASIS PortalGET1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDGET1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaGET1
DgiDB (Drug Gene Interaction Database)GET1
DoCM (Curated mutations)GET1
CIViC (Clinical Interpretations of Variants in Cancer)GET1
Cancer3DGET1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602915   
Orphanet
DisGeNETGET1
MedgenGET1
Genetic Testing Registry GET1
NextProtO00258 [Medical]
GENETestsGET1
Target ValidationGET1
Huge Navigator GET1 [HugePedia]
ClinGenGET1
Clinical trials, drugs, therapy
MyCancerGenomeGET1
Protein Interactions : CTDGET1
Pharm GKB GenePA37391
PharosO00258
Clinical trialGET1
Miscellaneous
canSAR (ICR)GET1
HarmonizomeGET1
DataMed IndexGET1
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXGET1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:51:21 CEST 2021

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