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GGT7 (gamma-glutamyltransferase 7)

Identity

Alias_namesGGTL5
GGTL3
gamma-glutamyltransferase-like 3
Alias_symbol (synonym)D20S101
dJ18C9.2
Other aliasGGT4
HGNC (Hugo) GGT7
LocusID (NCBI) 2686
Atlas_Id 43718
Location 20q11.22  [Link to chromosome band 20q11]
Location_base_pair Starts at 33432523 and ends at 33460661 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
GGT7 (20q11.22) / CREBBP (16p13.3)GGT7 (20q11.22) / PIGC (1q24.3)GGT7 (20q11.22) / SPEG (2q35)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GGT7   4259
Cards
Entrez_Gene (NCBI)GGT7  2686  gamma-glutamyltransferase 7
AliasesD20S101; GGT4; GGTL3; GGTL5; 
dJ18C9.2
GeneCards (Weizmann)GGT7
Ensembl hg19 (Hinxton)ENSG00000131067 [Gene_View]  chr20:33432523-33460661 [Contig_View]  GGT7 [Vega]
Ensembl hg38 (Hinxton)ENSG00000131067 [Gene_View]  chr20:33432523-33460661 [Contig_View]  GGT7 [Vega]
ICGC DataPortalENSG00000131067
TCGA cBioPortalGGT7
AceView (NCBI)GGT7
Genatlas (Paris)GGT7
WikiGenes2686
SOURCE (Princeton)GGT7
Genetics Home Reference (NIH)GGT7
Genomic and cartography
GoldenPath hg19 (UCSC)GGT7  -     chr20:33432523-33460661 -  20q11.22   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)GGT7  -     20q11.22   [Description]    (hg38-Dec_2013)
EnsemblGGT7 - 20q11.22 [CytoView hg19]  GGT7 - 20q11.22 [CytoView hg38]
Mapping of homologs : NCBIGGT7 [Mapview hg19]  GGT7 [Mapview hg38]
OMIM612342   
Gene and transcription
Genbank (Entrez)AK090413 AK097100 AK124788 AK299494 AY138815
RefSeq transcript (Entrez)NM_178026
RefSeq genomic (Entrez)NC_000020 NC_018931 NT_011362 NW_004929418
Consensus coding sequences : CCDS (NCBI)GGT7
Cluster EST : UnigeneHs.433738 [ NCBI ]
CGAP (NCI)Hs.433738
Alternative Splicing GalleryENSG00000131067
Gene ExpressionGGT7 [ NCBI-GEO ]   GGT7 [ EBI - ARRAY_EXPRESS ]   GGT7 [ SEEK ]   GGT7 [ MEM ]
Gene Expression Viewer (FireBrowse)GGT7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2686
GTEX Portal (Tissue expression)GGT7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UJ14   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UJ14  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UJ14
Splice isoforms : SwissVarQ9UJ14
Catalytic activity : Enzyme2.3.2.2 [ Enzyme-Expasy ]   2.3.2.22.3.2.2 [ IntEnz-EBI ]   2.3.2.2 [ BRENDA ]   2.3.2.2 [ KEGG ]   
PhosPhoSitePlusQ9UJ14
Domains : Interpro (EBI)GGT_peptidase    Ntn_hydrolases_N   
Domain families : Pfam (Sanger)G_glu_transpept (PF01019)   
Domain families : Pfam (NCBI)pfam01019   
Conserved Domain (NCBI)GGT7
DMDM Disease mutations2686
Blocks (Seattle)GGT7
SuperfamilyQ9UJ14
Human Protein AtlasENSG00000131067
Peptide AtlasQ9UJ14
HPRD07488
IPIIPI00030634   IPI00167415   IPI00339302   IPI00339303   IPI00930090   IPI00909002   IPI00978133   IPI00798319   
Protein Interaction databases
DIP (DOE-UCLA)Q9UJ14
IntAct (EBI)Q9UJ14
FunCoupENSG00000131067
BioGRIDGGT7
STRING (EMBL)GGT7
ZODIACGGT7
Ontologies - Pathways
QuickGOQ9UJ14
Ontology : AmiGOgamma-glutamyltransferase activity  protein binding  proteolysis  glutathione metabolic process  glutathione biosynthetic process  integral component of membrane  leukotriene biosynthetic process  anchored component of external side of plasma membrane  glutathione hydrolase activity  
Ontology : EGO-EBIgamma-glutamyltransferase activity  protein binding  proteolysis  glutathione metabolic process  glutathione biosynthetic process  integral component of membrane  leukotriene biosynthetic process  anchored component of external side of plasma membrane  glutathione hydrolase activity  
Pathways : KEGGTaurine and hypotaurine metabolism    Cyanoamino acid metabolism    Glutathione metabolism    Arachidonic acid metabolism   
NDEx NetworkGGT7
Atlas of Cancer Signalling NetworkGGT7
Wikipedia pathwaysGGT7
Orthology - Evolution
OrthoDB2686
GeneTree (enSembl)ENSG00000131067
Phylogenetic Trees/Animal Genes : TreeFamGGT7
HOVERGENQ9UJ14
HOGENOMQ9UJ14
Homologs : HomoloGeneGGT7
Homology/Alignments : Family Browser (UCSC)GGT7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGGT7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GGT7
dbVarGGT7
ClinVarGGT7
1000_GenomesGGT7 
Exome Variant ServerGGT7
ExAC (Exome Aggregation Consortium)GGT7 (select the gene name)
Genetic variants : HAPMAP2686
Genomic Variants (DGV)GGT7 [DGVbeta]
DECIPHER (Syndromes)20:33432523-33460661  ENSG00000131067
CONAN: Copy Number AnalysisGGT7 
Mutations
ICGC Data PortalGGT7 
TCGA Data PortalGGT7 
Broad Tumor PortalGGT7
OASIS PortalGGT7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGGT7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGGT7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GGT7
DgiDB (Drug Gene Interaction Database)GGT7
DoCM (Curated mutations)GGT7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GGT7 (select a term)
intoGenGGT7
Cancer3DGGT7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612342   
Orphanet
MedgenGGT7
Genetic Testing Registry GGT7
NextProtQ9UJ14 [Medical]
TSGene2686
GENETestsGGT7
Huge Navigator GGT7 [HugePedia]
snp3D : Map Gene to Disease2686
BioCentury BCIQGGT7
ClinGenGGT7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2686
Chemical/Pharm GKB GenePA28669
Clinical trialGGT7
Miscellaneous
canSAR (ICR)GGT7 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGGT7
EVEXGGT7
GoPubMedGGT7
iHOPGGT7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Mar 30 15:02:20 CEST 2017

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