Atlas of Genetics and Cytogenetics in Oncology and Haematology


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GHRLOS (ghrelin opposite strand/antisense RNA)

Identity

Alias_namesghrelin opposite strand RNA (non-protein coding)
ghrelin opposite strand/antisense RNA (non-protein coding)
Alias_symbol (synonym)NCRNA00068
GHRL-AS1
Other aliasGHRLAS
HGNC (Hugo) GHRLOS
LocusID (NCBI) 100126793
Atlas_Id 63777
Location 3p25.3  [Link to chromosome band 3p25]
Location_base_pair Starts at 10280952 and ends at 10293449 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TRAK2 (2q33.1) / GHRLOS (3p25.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GHRLOS   33885
Cards
Entrez_Gene (NCBI)GHRLOS  100126793  ghrelin opposite strand/antisense RNA
AliasesGHRL-AS1; GHRLAS; NCRNA00068
GeneCards (Weizmann)GHRLOS
Ensembl hg19 (Hinxton)ENSG00000240288 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000240288 [Gene_View]  chr3:10280952-10293449 [Contig_View]  GHRLOS [Vega]
ICGC DataPortalENSG00000240288
TCGA cBioPortalGHRLOS
AceView (NCBI)GHRLOS
Genatlas (Paris)GHRLOS
WikiGenes100126793
SOURCE (Princeton)GHRLOS
Genetics Home Reference (NIH)GHRLOS
Genomic and cartography
GoldenPath hg38 (UCSC)GHRLOS  -     chr3:10280952-10293449 +  3p25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GHRLOS  -     3p25.3   [Description]    (hg19-Feb_2009)
EnsemblGHRLOS - 3p25.3 [CytoView hg19]  GHRLOS - 3p25.3 [CytoView hg38]
Mapping of homologs : NCBIGHRLOS [Mapview hg19]  GHRLOS [Mapview hg38]
Gene and transcription
Genbank (Entrez)BM991802 BX118778 EF549558 EF549559 EF549560
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GHRLOS
Cluster EST : UnigeneHs.672979 [ NCBI ]
CGAP (NCI)Hs.672979
Alternative Splicing GalleryENSG00000240288
Gene ExpressionGHRLOS [ NCBI-GEO ]   GHRLOS [ EBI - ARRAY_EXPRESS ]   GHRLOS [ SEEK ]   GHRLOS [ MEM ]
Gene Expression Viewer (FireBrowse)GHRLOS [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100126793
GTEX Portal (Tissue expression)GHRLOS
Human Protein AtlasENSG00000240288-GHRLOS [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GHRLOS
DMDM Disease mutations100126793
Blocks (Seattle)GHRLOS
Human Protein Atlas [tissue]ENSG00000240288-GHRLOS [tissue]
Protein Interaction databases
FunCoupENSG00000240288
BioGRIDGHRLOS
STRING (EMBL)GHRLOS
ZODIACGHRLOS
Ontologies - Pathways
Huge Navigator GHRLOS [HugePedia]
snp3D : Map Gene to Disease100126793
BioCentury BCIQGHRLOS
ClinGenGHRLOS
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100126793
Chemical/Pharm GKB GenePA162389553
Clinical trialGHRLOS
Miscellaneous
canSAR (ICR)GHRLOS (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGHRLOS
EVEXGHRLOS
GoPubMedGHRLOS
iHOPGHRLOS
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:07:32 CET 2017

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