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GID8 (GID complex subunit 8 homolog)

Identity

Alias (NCBI)C20orf11
TWA1
HGNC (Hugo) GID8
HGNC Alias symbFLJ20602
bA305P22.1
TWA1
HGNC Alias nametwo hybrid associated protein No. 1 with RanBPM
HGNC Previous nameC20orf11
HGNC Previous namechromosome 20 open reading frame 11
 GID complex subunit 8 homolog (S. cerevisiae)
 GID complex subunit 8
LocusID (NCBI) 54994
Atlas_Id 57746
Location 20q13.33  [Link to chromosome band 20q13]
Location_base_pair Starts at 62938147 and ends at 62948475 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)GID8   15857
Cards
Entrez_Gene (NCBI)GID8    GID complex subunit 8 homolog
AliasesC20orf11; TWA1
GeneCards (Weizmann)GID8
Ensembl hg19 (Hinxton)ENSG00000101193 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000101193 [Gene_View]  ENSG00000101193 [Sequence]  chr20:62938147-62948475 [Contig_View]  GID8 [Vega]
ICGC DataPortalENSG00000101193
TCGA cBioPortalGID8
AceView (NCBI)GID8
Genatlas (Paris)GID8
SOURCE (Princeton)GID8
Genetics Home Reference (NIH)GID8
Genomic and cartography
GoldenPath hg38 (UCSC)GID8  -     chr20:62938147-62948475 +  20q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GID8  -     20q13.33   [Description]    (hg19-Feb_2009)
GoldenPathGID8 - 20q13.33 [CytoView hg19]  GID8 - 20q13.33 [CytoView hg38]
ImmunoBaseENSG00000101193
Genome Data Viewer NCBIGID8 [Mapview hg19]  
OMIM611625   
Gene and transcription
Genbank (Entrez)AK000609 AK025775 AK299509 BC031819 BC032120
RefSeq transcript (Entrez)NM_017896
Consensus coding sequences : CCDS (NCBI)GID8
Gene ExpressionGID8 [ NCBI-GEO ]   GID8 [ EBI - ARRAY_EXPRESS ]   GID8 [ SEEK ]   GID8 [ MEM ]
Gene Expression Viewer (FireBrowse)GID8 [ Firebrowse - Broad ]
GenevisibleExpression of GID8 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54994
GTEX Portal (Tissue expression)GID8
Human Protein AtlasENSG00000101193-GID8 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NWU2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NWU2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NWU2
PhosPhoSitePlusQ9NWU2
Domaine pattern : Prosite (Expaxy)CTLH (PS50897)    LISH (PS50896)   
Domains : Interpro (EBI)CRA_dom    CTLH/CRA    CTLH_C    LisH   
Domain families : Pfam (Sanger)CLTH (PF10607)    LisH (PF08513)   
Domain families : Pfam (NCBI)pfam10607    pfam08513   
Domain families : Smart (EMBL)CRA (SM00757)  CTLH (SM00668)  LisH (SM00667)  
Conserved Domain (NCBI)GID8
SuperfamilyQ9NWU2
AlphaFold pdb e-kbQ9NWU2   
Human Protein Atlas [tissue]ENSG00000101193-GID8 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q9NWU2
IntAct (EBI)Q9NWU2
BioGRIDGID8
STRING (EMBL)GID8
ZODIACGID8
Ontologies - Pathways
QuickGOQ9NWU2
Ontology : AmiGOubiquitin ligase complex  protein binding  nucleus  nucleus  nucleoplasm  cytoplasm  cytoplasm  cytosol  positive regulation of cell population proliferation  Wnt signaling pathway  cell junction  protein homodimerization activity  proteasome-mediated ubiquitin-dependent protein catabolic process  positive regulation of canonical Wnt signaling pathway  positive regulation of canonical Wnt signaling pathway  
Ontology : EGO-EBIubiquitin ligase complex  protein binding  nucleus  nucleus  nucleoplasm  cytoplasm  cytoplasm  cytosol  positive regulation of cell population proliferation  Wnt signaling pathway  cell junction  protein homodimerization activity  proteasome-mediated ubiquitin-dependent protein catabolic process  positive regulation of canonical Wnt signaling pathway  positive regulation of canonical Wnt signaling pathway  
NDEx NetworkGID8
Atlas of Cancer Signalling NetworkGID8
Wikipedia pathwaysGID8
Orthology - Evolution
OrthoDB54994
GeneTree (enSembl)ENSG00000101193
Phylogenetic Trees/Animal Genes : TreeFamGID8
Homologs : HomoloGeneGID8
Homology/Alignments : Family Browser (UCSC)GID8
Gene fusions - Rearrangements
Fusion : QuiverGID8
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGID8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GID8
dbVarGID8
ClinVarGID8
MonarchGID8
1000_GenomesGID8 
Exome Variant ServerGID8
GNOMAD BrowserENSG00000101193
Varsome BrowserGID8
ACMGGID8 variants
VarityQ9NWU2
Genomic Variants (DGV)GID8 [DGVbeta]
DECIPHERGID8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGID8 
Mutations
ICGC Data PortalGID8 
TCGA Data PortalGID8 
Broad Tumor PortalGID8
OASIS PortalGID8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGID8  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DGID8
Mutations and Diseases : HGMDGID8
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaGID8
DgiDB (Drug Gene Interaction Database)GID8
DoCM (Curated mutations)GID8
CIViC (Clinical Interpretations of Variants in Cancer)GID8
Cancer3DGID8
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611625   
Orphanet
DisGeNETGID8
MedgenGID8
Genetic Testing Registry GID8
NextProtQ9NWU2 [Medical]
GENETestsGID8
Target ValidationGID8
Huge Navigator GID8 [HugePedia]
ClinGenGID8
Clinical trials, drugs, therapy
MyCancerGenomeGID8
Protein Interactions : CTDGID8
Pharm GKB GenePA25649
PharosQ9NWU2
Clinical trialGID8
Miscellaneous
canSAR (ICR)GID8
HarmonizomeGID8
DataMed IndexGID8
Probes
Litterature
PubMed48 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXGID8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:10:44 CEST 2021

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