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GIMAP4 (GTPase, IMAP family member 4)

Identity

Other namesIAN-1
IAN1
IMAP4
HGNC (Hugo) GIMAP4
LocusID (NCBI) 55303
Location 7q36.1
Location_base_pair Starts at 150264458 and ends at 150271041 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)GIMAP4   21872
Cards
Entrez_Gene (NCBI)GIMAP4  55303  GTPase, IMAP family member 4
GeneCards (Weizmann)GIMAP4
Ensembl (Hinxton)ENSG00000133574 [Gene_View]  chr7:150264458-150271041 [Contig_View]  GIMAP4 [Vega]
ICGC DataPortalENSG00000133574
cBioPortalGIMAP4
AceView (NCBI)GIMAP4
Genatlas (Paris)GIMAP4
WikiGenes55303
SOURCE (Princeton)NM_018326
Genomic and cartography
GoldenPath (UCSC)GIMAP4  -  7q36.1   chr7:150264458-150271041 +  7q36.1   [Description]    (hg19-Feb_2009)
EnsemblGIMAP4 - 7q36.1 [CytoView]
Mapping of homologs : NCBIGIMAP4 [Mapview]
OMIM608087   
Gene and transcription
Genbank (Entrez)AF117333 AJ227872 AK001972 AK301441 AK301606
RefSeq transcript (Entrez)NM_018326
RefSeq genomic (Entrez)AC_000068 AC_000139 NC_000007 NC_018918 NT_007914 NT_079596 NW_001839088 NW_004929333
Consensus coding sequences : CCDS (NCBI)GIMAP4
Cluster EST : UnigeneHs.648582 [ NCBI ]
CGAP (NCI)Hs.648582
Alternative Splicing : Fast-db (Paris)GSHG0027874
Alternative Splicing GalleryENSG00000133574
Gene ExpressionGIMAP4 [ NCBI-GEO ]     GIMAP4 [ SEEK ]   GIMAP4 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NUV9 (Uniprot)
NextProtQ9NUV9  [Medical]
With graphics : InterProQ9NUV9
Splice isoforms : SwissVarQ9NUV9 (Swissvar)
Domains : Interpro (EBI)AIG1 [organisation]   P-loop_NTPase [organisation]  
Related proteins : CluSTrQ9NUV9
Domain families : Pfam (Sanger)AIG1 (PF04548)   
Domain families : Pfam (NCBI)pfam04548   
DMDM Disease mutations55303
Blocks (Seattle)Q9NUV9
PDB (SRS)3LXX   
PDB (PDBSum)3LXX   
PDB (IMB)3LXX   
PDB (RSDB)3LXX   
Human Protein AtlasENSG00000133574 [gene] [tissue] [antibody] [cell] [cancer]
Peptide AtlasQ9NUV9
HPRD16281
IPIIPI00939265   IPI00908338   IPI00019563   IPI00947057   
Protein Interaction databases
DIP (DOE-UCLA)Q9NUV9
IntAct (EBI)Q9NUV9
FunCoupENSG00000133574
BioGRIDGIMAP4
InParanoidQ9NUV9
Interologous Interaction database Q9NUV9
IntegromeDBGIMAP4
STRING (EMBL)GIMAP4
Ontologies - Pathways
Ontology : AmiGOGTP binding  nucleus  nucleolus  cytosol  
Ontology : EGO-EBIGTP binding  nucleus  nucleolus  cytosol  
Protein Interaction DatabaseGIMAP4
Wikipedia pathwaysGIMAP4
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)GIMAP4
snp3D : Map Gene to Disease55303
SNP (GeneSNP Utah)GIMAP4
SNP : HGBaseGIMAP4
Genetic variants : HAPMAPGIMAP4
Exome VariantGIMAP4
1000_GenomesGIMAP4 
ICGC programENSG00000133574 
Somatic Mutations in Cancer : COSMICGIMAP4 
CONAN: Copy Number AnalysisGIMAP4 
Mutations and Diseases : HGMDGIMAP4
Genomic VariantsGIMAP4  GIMAP4 [DGVbeta]
dbVarGIMAP4
ClinVarGIMAP4
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM608087   
MedgenGIMAP4
GENETestsGIMAP4
Disease Genetic AssociationGIMAP4
Huge Navigator GIMAP4 [HugePedia]  GIMAP4 [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneGIMAP4
Homology/Alignments : Family Browser (UCSC)GIMAP4
Phylogenetic Trees/Animal Genes : TreeFamGIMAP4
Chemical/Protein Interactions : CTD55303
Chemical/Pharm GKB GenePA128394681
Clinical trialGIMAP4
Cancer Resource (Charite)ENSG00000133574
Other databases
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
CoreMineGIMAP4
iHOPGIMAP4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jul 11 16:57:07 CEST 2014

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