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GIMAP6 (GTPase, IMAP family member 6)

Identity

Alias_symbol (synonym)FLJ22690
IAN6
Other aliasIAN-2
IAN-6
IAN2
HGNC (Hugo) GIMAP6
LocusID (NCBI) 474344
Atlas_Id 63785
Location 7q36.1  [Link to chromosome band 7q36]
Location_base_pair Starts at 150322464 and ends at 150329736 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GIMAP6   21918
Cards
Entrez_Gene (NCBI)GIMAP6  474344  GTPase, IMAP family member 6
AliasesIAN-2; IAN-6; IAN2; IAN6
GeneCards (Weizmann)GIMAP6
Ensembl hg19 (Hinxton)ENSG00000133561 [Gene_View]  chr7:150322464-150329736 [Contig_View]  GIMAP6 [Vega]
Ensembl hg38 (Hinxton)ENSG00000133561 [Gene_View]  chr7:150322464-150329736 [Contig_View]  GIMAP6 [Vega]
ICGC DataPortalENSG00000133561
TCGA cBioPortalGIMAP6
AceView (NCBI)GIMAP6
Genatlas (Paris)GIMAP6
WikiGenes474344
SOURCE (Princeton)GIMAP6
Genetics Home Reference (NIH)GIMAP6
Genomic and cartography
GoldenPath hg19 (UCSC)GIMAP6  -     chr7:150322464-150329736 -  7q36.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)GIMAP6  -     7q36.1   [Description]    (hg38-Dec_2013)
EnsemblGIMAP6 - 7q36.1 [CytoView hg19]  GIMAP6 - 7q36.1 [CytoView hg38]
Mapping of homologs : NCBIGIMAP6 [Mapview hg19]  GIMAP6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ580952 AK026343 AK026396 AK074044 AK294989
RefSeq transcript (Entrez)NM_001007224 NM_001244071 NM_001244072 NM_024711
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NW_004929333
Consensus coding sequences : CCDS (NCBI)GIMAP6
Cluster EST : UnigeneHs.647105 [ NCBI ]
CGAP (NCI)Hs.647105
Alternative Splicing GalleryENSG00000133561
Gene ExpressionGIMAP6 [ NCBI-GEO ]   GIMAP6 [ EBI - ARRAY_EXPRESS ]   GIMAP6 [ SEEK ]   GIMAP6 [ MEM ]
Gene Expression Viewer (FireBrowse)GIMAP6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)474344
GTEX Portal (Tissue expression)GIMAP6
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6P9H5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6P9H5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6P9H5
Splice isoforms : SwissVarQ6P9H5
PhosPhoSitePlusQ6P9H5
Domaine pattern : Prosite (Expaxy)G_AIG1 (PS51720)   
Domains : Interpro (EBI)G_AIG1    P-loop_NTPase   
Domain families : Pfam (Sanger)AIG1 (PF04548)   
Domain families : Pfam (NCBI)pfam04548   
Conserved Domain (NCBI)GIMAP6
DMDM Disease mutations474344
Blocks (Seattle)GIMAP6
SuperfamilyQ6P9H5
Human Protein AtlasENSG00000133561
Peptide AtlasQ6P9H5
HPRD13576
IPIIPI00418547   IPI00386143   IPI00910064   IPI00291816   IPI00946607   IPI01012399   
Protein Interaction databases
DIP (DOE-UCLA)Q6P9H5
IntAct (EBI)Q6P9H5
FunCoupENSG00000133561
BioGRIDGIMAP6
STRING (EMBL)GIMAP6
ZODIACGIMAP6
Ontologies - Pathways
QuickGOQ6P9H5
Ontology : AmiGOGTP binding  cytosol  
Ontology : EGO-EBIGTP binding  cytosol  
NDEx NetworkGIMAP6
Atlas of Cancer Signalling NetworkGIMAP6
Wikipedia pathwaysGIMAP6
Orthology - Evolution
OrthoDB474344
GeneTree (enSembl)ENSG00000133561
Phylogenetic Trees/Animal Genes : TreeFamGIMAP6
HOVERGENQ6P9H5
HOGENOMQ6P9H5
Homologs : HomoloGeneGIMAP6
Homology/Alignments : Family Browser (UCSC)GIMAP6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGIMAP6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GIMAP6
dbVarGIMAP6
ClinVarGIMAP6
1000_GenomesGIMAP6 
Exome Variant ServerGIMAP6
ExAC (Exome Aggregation Consortium)GIMAP6 (select the gene name)
Genetic variants : HAPMAP474344
Genomic Variants (DGV)GIMAP6 [DGVbeta]
DECIPHER (Syndromes)7:150322464-150329736  ENSG00000133561
CONAN: Copy Number AnalysisGIMAP6 
Mutations
ICGC Data PortalGIMAP6 
TCGA Data PortalGIMAP6 
Broad Tumor PortalGIMAP6
OASIS PortalGIMAP6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGIMAP6  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGIMAP6
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GIMAP6
DgiDB (Drug Gene Interaction Database)GIMAP6
DoCM (Curated mutations)GIMAP6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GIMAP6 (select a term)
intoGenGIMAP6
Cancer3DGIMAP6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGIMAP6
Genetic Testing Registry GIMAP6
NextProtQ6P9H5 [Medical]
TSGene474344
GENETestsGIMAP6
Huge Navigator GIMAP6 [HugePedia]
snp3D : Map Gene to Disease474344
BioCentury BCIQGIMAP6
ClinGenGIMAP6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD474344
Chemical/Pharm GKB GenePA128394720
Clinical trialGIMAP6
Miscellaneous
canSAR (ICR)GIMAP6 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGIMAP6
EVEXGIMAP6
GoPubMedGIMAP6
iHOPGIMAP6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:06:06 CET 2017

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