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GIMAP7 (GTPase, IMAP family member 7)

Identity

Alias_symbol (synonym)MGC27027
IAN7
Other aliashIAN7
HGNC (Hugo) GIMAP7
LocusID (NCBI) 168537
Atlas_Id 63786
Location 7q36.1  [Link to chromosome band 7q36]
Location_base_pair Starts at 150514857 and ends at 150521073 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GIMAP7 (7q36.1) / ZNF212 (7q36.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GIMAP7   22404
Cards
Entrez_Gene (NCBI)GIMAP7  168537  GTPase, IMAP family member 7
AliasesIAN7; hIAN7
GeneCards (Weizmann)GIMAP7
Ensembl hg19 (Hinxton)ENSG00000179144 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000179144 [Gene_View]  chr7:150514857-150521073 [Contig_View]  GIMAP7 [Vega]
ICGC DataPortalENSG00000179144
TCGA cBioPortalGIMAP7
AceView (NCBI)GIMAP7
Genatlas (Paris)GIMAP7
WikiGenes168537
SOURCE (Princeton)GIMAP7
Genetics Home Reference (NIH)GIMAP7
Genomic and cartography
GoldenPath hg38 (UCSC)GIMAP7  -     chr7:150514857-150521073 +  7q36.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GIMAP7  -     7q36.1   [Description]    (hg19-Feb_2009)
EnsemblGIMAP7 - 7q36.1 [CytoView hg19]  GIMAP7 - 7q36.1 [CytoView hg38]
Mapping of homologs : NCBIGIMAP7 [Mapview hg19]  GIMAP7 [Mapview hg38]
OMIM616961   
Gene and transcription
Genbank (Entrez)AA854865 BC006010 BC027613 BX440511 DQ890939
RefSeq transcript (Entrez)NM_153236
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GIMAP7
Cluster EST : UnigeneHs.647074 [ NCBI ]
CGAP (NCI)Hs.647074
Alternative Splicing GalleryENSG00000179144
Gene ExpressionGIMAP7 [ NCBI-GEO ]   GIMAP7 [ EBI - ARRAY_EXPRESS ]   GIMAP7 [ SEEK ]   GIMAP7 [ MEM ]
Gene Expression Viewer (FireBrowse)GIMAP7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)168537
GTEX Portal (Tissue expression)GIMAP7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NHV1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NHV1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NHV1
Splice isoforms : SwissVarQ8NHV1
PhosPhoSitePlusQ8NHV1
Domaine pattern : Prosite (Expaxy)G_AIG1 (PS51720)   
Domains : Interpro (EBI)G_AIG1    P-loop_NTPase   
Domain families : Pfam (Sanger)AIG1 (PF04548)   
Domain families : Pfam (NCBI)pfam04548   
Conserved Domain (NCBI)GIMAP7
DMDM Disease mutations168537
Blocks (Seattle)GIMAP7
PDB (SRS)3ZJC   
PDB (PDBSum)3ZJC   
PDB (IMB)3ZJC   
PDB (RSDB)3ZJC   
Structural Biology KnowledgeBase3ZJC   
SCOP (Structural Classification of Proteins)3ZJC   
CATH (Classification of proteins structures)3ZJC   
SuperfamilyQ8NHV1
Human Protein AtlasENSG00000179144
Peptide AtlasQ8NHV1
HPRD17039
IPIIPI00169340   
Protein Interaction databases
DIP (DOE-UCLA)Q8NHV1
IntAct (EBI)Q8NHV1
FunCoupENSG00000179144
BioGRIDGIMAP7
STRING (EMBL)GIMAP7
ZODIACGIMAP7
Ontologies - Pathways
QuickGOQ8NHV1
Ontology : AmiGOGTPase activity  protein binding  GTP binding  endoplasmic reticulum  Golgi apparatus  lipid particle  cytosol  protein homodimerization activity  intracellular membrane-bounded organelle  
Ontology : EGO-EBIGTPase activity  protein binding  GTP binding  endoplasmic reticulum  Golgi apparatus  lipid particle  cytosol  protein homodimerization activity  intracellular membrane-bounded organelle  
NDEx NetworkGIMAP7
Atlas of Cancer Signalling NetworkGIMAP7
Wikipedia pathwaysGIMAP7
Orthology - Evolution
OrthoDB168537
GeneTree (enSembl)ENSG00000179144
Phylogenetic Trees/Animal Genes : TreeFamGIMAP7
HOVERGENQ8NHV1
HOGENOMQ8NHV1
Homologs : HomoloGeneGIMAP7
Homology/Alignments : Family Browser (UCSC)GIMAP7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGIMAP7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GIMAP7
dbVarGIMAP7
ClinVarGIMAP7
1000_GenomesGIMAP7 
Exome Variant ServerGIMAP7
ExAC (Exome Aggregation Consortium)GIMAP7 (select the gene name)
Genetic variants : HAPMAP168537
Genomic Variants (DGV)GIMAP7 [DGVbeta]
DECIPHERGIMAP7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGIMAP7 
Mutations
ICGC Data PortalGIMAP7 
TCGA Data PortalGIMAP7 
Broad Tumor PortalGIMAP7
OASIS PortalGIMAP7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGIMAP7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGIMAP7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GIMAP7
DgiDB (Drug Gene Interaction Database)GIMAP7
DoCM (Curated mutations)GIMAP7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GIMAP7 (select a term)
intoGenGIMAP7
Cancer3DGIMAP7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616961   
Orphanet
MedgenGIMAP7
Genetic Testing Registry GIMAP7
NextProtQ8NHV1 [Medical]
TSGene168537
GENETestsGIMAP7
Target ValidationGIMAP7
Huge Navigator GIMAP7 [HugePedia]
snp3D : Map Gene to Disease168537
BioCentury BCIQGIMAP7
ClinGenGIMAP7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD168537
Chemical/Pharm GKB GenePA134915933
Clinical trialGIMAP7
Miscellaneous
canSAR (ICR)GIMAP7 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGIMAP7
EVEXGIMAP7
GoPubMedGIMAP7
iHOPGIMAP7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:50:37 CEST 2017

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