Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

GIMAP8 (GTPase, IMAP family member 8)

Identity

Alias_symbol (synonym)DKFZp667I133
hIAN6
IAN9
Other aliasIAN-9
IAN6
IANT
HGNC (Hugo) GIMAP8
LocusID (NCBI) 155038
Atlas_Id 63787
Location 7q36.1  [Link to chromosome band 7q36]
Location_base_pair Starts at 150450630 and ends at 150479395 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)GIMAP8   21792
Cards
Entrez_Gene (NCBI)GIMAP8  155038  GTPase, IMAP family member 8
AliasesIAN-9; IAN6; IAN9; IANT
GeneCards (Weizmann)GIMAP8
Ensembl hg19 (Hinxton)ENSG00000171115 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171115 [Gene_View]  chr7:150450630-150479395 [Contig_View]  GIMAP8 [Vega]
ICGC DataPortalENSG00000171115
TCGA cBioPortalGIMAP8
AceView (NCBI)GIMAP8
Genatlas (Paris)GIMAP8
WikiGenes155038
SOURCE (Princeton)GIMAP8
Genetics Home Reference (NIH)GIMAP8
Genomic and cartography
GoldenPath hg38 (UCSC)GIMAP8  -     chr7:150450630-150479395 +  7q36.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GIMAP8  -     7q36.1   [Description]    (hg19-Feb_2009)
EnsemblGIMAP8 - 7q36.1 [CytoView hg19]  GIMAP8 - 7q36.1 [CytoView hg38]
Mapping of homologs : NCBIGIMAP8 [Mapview hg19]  GIMAP8 [Mapview hg38]
OMIM616962   
Gene and transcription
Genbank (Entrez)AJ633686 AK057969 AK098320 AK314426 AL834361
RefSeq transcript (Entrez)NM_175571
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GIMAP8
Cluster EST : UnigeneHs.647121 [ NCBI ]
CGAP (NCI)Hs.647121
Alternative Splicing GalleryENSG00000171115
Gene ExpressionGIMAP8 [ NCBI-GEO ]   GIMAP8 [ EBI - ARRAY_EXPRESS ]   GIMAP8 [ SEEK ]   GIMAP8 [ MEM ]
Gene Expression Viewer (FireBrowse)GIMAP8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)155038
GTEX Portal (Tissue expression)GIMAP8
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8ND71   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8ND71  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8ND71
Splice isoforms : SwissVarQ8ND71
PhosPhoSitePlusQ8ND71
Domaine pattern : Prosite (Expaxy)G_AIG1 (PS51720)   
Domains : Interpro (EBI)G_AIG1    P-loop_NTPase   
Domain families : Pfam (Sanger)AIG1 (PF04548)   
Domain families : Pfam (NCBI)pfam04548   
Conserved Domain (NCBI)GIMAP8
DMDM Disease mutations155038
Blocks (Seattle)GIMAP8
SuperfamilyQ8ND71
Human Protein AtlasENSG00000171115
Peptide AtlasQ8ND71
HPRD13577
IPIIPI00168482   IPI00978894   
Protein Interaction databases
DIP (DOE-UCLA)Q8ND71
IntAct (EBI)Q8ND71
FunCoupENSG00000171115
BioGRIDGIMAP8
STRING (EMBL)GIMAP8
ZODIACGIMAP8
Ontologies - Pathways
QuickGOQ8ND71
Ontology : AmiGOGTP binding  mitochondrion  endoplasmic reticulum  Golgi apparatus  cytosol  regulation of T cell apoptotic process  
Ontology : EGO-EBIGTP binding  mitochondrion  endoplasmic reticulum  Golgi apparatus  cytosol  regulation of T cell apoptotic process  
NDEx NetworkGIMAP8
Atlas of Cancer Signalling NetworkGIMAP8
Wikipedia pathwaysGIMAP8
Orthology - Evolution
OrthoDB155038
GeneTree (enSembl)ENSG00000171115
Phylogenetic Trees/Animal Genes : TreeFamGIMAP8
HOVERGENQ8ND71
HOGENOMQ8ND71
Homologs : HomoloGeneGIMAP8
Homology/Alignments : Family Browser (UCSC)GIMAP8
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGIMAP8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GIMAP8
dbVarGIMAP8
ClinVarGIMAP8
1000_GenomesGIMAP8 
Exome Variant ServerGIMAP8
ExAC (Exome Aggregation Consortium)GIMAP8 (select the gene name)
Genetic variants : HAPMAP155038
Genomic Variants (DGV)GIMAP8 [DGVbeta]
DECIPHERGIMAP8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGIMAP8 
Mutations
ICGC Data PortalGIMAP8 
TCGA Data PortalGIMAP8 
Broad Tumor PortalGIMAP8
OASIS PortalGIMAP8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGIMAP8  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGIMAP8
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GIMAP8
DgiDB (Drug Gene Interaction Database)GIMAP8
DoCM (Curated mutations)GIMAP8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GIMAP8 (select a term)
intoGenGIMAP8
Cancer3DGIMAP8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616962   
Orphanet
MedgenGIMAP8
Genetic Testing Registry GIMAP8
NextProtQ8ND71 [Medical]
TSGene155038
GENETestsGIMAP8
Target ValidationGIMAP8
Huge Navigator GIMAP8 [HugePedia]
snp3D : Map Gene to Disease155038
BioCentury BCIQGIMAP8
ClinGenGIMAP8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD155038
Chemical/Pharm GKB GenePA128394762
Clinical trialGIMAP8
Miscellaneous
canSAR (ICR)GIMAP8 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGIMAP8
EVEXGIMAP8
GoPubMedGIMAP8
iHOPGIMAP8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:50:37 CEST 2017
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.