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GIP (gastric inhibitory polypeptide)

Identity

Other alias-
HGNC (Hugo) GIP
LocusID (NCBI) 2695
Atlas_Id 40713
Location 17q21.32  [Link to chromosome band 17q21]
Location_base_pair Starts at 48958556 and ends at 48968593 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
FAM222B (17q11.2) / GIP (17q21.32)C17orf63 GIP 17q21.32

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GIP   4270
Cards
Entrez_Gene (NCBI)GIP  2695  gastric inhibitory polypeptide
Aliases
GeneCards (Weizmann)GIP
Ensembl hg19 (Hinxton)ENSG00000159224 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000159224 [Gene_View]  chr17:48958556-48968593 [Contig_View]  GIP [Vega]
ICGC DataPortalENSG00000159224
TCGA cBioPortalGIP
AceView (NCBI)GIP
Genatlas (Paris)GIP
WikiGenes2695
SOURCE (Princeton)GIP
Genetics Home Reference (NIH)GIP
Genomic and cartography
GoldenPath hg38 (UCSC)GIP  -     chr17:48958556-48968593 -  17q21.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GIP  -     17q21.32   [Description]    (hg19-Feb_2009)
EnsemblGIP - 17q21.32 [CytoView hg19]  GIP - 17q21.32 [CytoView hg38]
Mapping of homologs : NCBIGIP [Mapview hg19]  GIP [Mapview hg38]
OMIM137240   
Gene and transcription
Genbank (Entrez)BC069100 BC069663 BC069686 BC069746 BC096146
RefSeq transcript (Entrez)NM_004123
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GIP
Cluster EST : UnigeneHs.1454 [ NCBI ]
CGAP (NCI)Hs.1454
Alternative Splicing GalleryENSG00000159224
Gene ExpressionGIP [ NCBI-GEO ]   GIP [ EBI - ARRAY_EXPRESS ]   GIP [ SEEK ]   GIP [ MEM ]
Gene Expression Viewer (FireBrowse)GIP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2695
GTEX Portal (Tissue expression)GIP
Protein : pattern, domain, 3D structure
UniProt/SwissProtP09681   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP09681  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP09681
Splice isoforms : SwissVarP09681
PhosPhoSitePlusP09681
Domaine pattern : Prosite (Expaxy)GLUCAGON (PS00260)   
Domains : Interpro (EBI)Glucagon_GIP_secretin_VIP   
Domain families : Pfam (Sanger)Hormone_2 (PF00123)   
Domain families : Pfam (NCBI)pfam00123   
Domain families : Smart (EMBL)GLUCA (SM00070)  
Conserved Domain (NCBI)GIP
DMDM Disease mutations2695
Blocks (Seattle)GIP
PDB (SRS)1T5Q    2B4N    2L70    2L71    2OBU    2QKH   
PDB (PDBSum)1T5Q    2B4N    2L70    2L71    2OBU    2QKH   
PDB (IMB)1T5Q    2B4N    2L70    2L71    2OBU    2QKH   
PDB (RSDB)1T5Q    2B4N    2L70    2L71    2OBU    2QKH   
Structural Biology KnowledgeBase1T5Q    2B4N    2L70    2L71    2OBU    2QKH   
SCOP (Structural Classification of Proteins)1T5Q    2B4N    2L70    2L71    2OBU    2QKH   
CATH (Classification of proteins structures)1T5Q    2B4N    2L70    2L71    2OBU    2QKH   
SuperfamilyP09681
Human Protein AtlasENSG00000159224
Peptide AtlasP09681
HPRD15925
IPIIPI00015998   
Protein Interaction databases
DIP (DOE-UCLA)P09681
IntAct (EBI)P09681
FunCoupENSG00000159224
BioGRIDGIP
STRING (EMBL)GIP
ZODIACGIP
Ontologies - Pathways
QuickGOP09681
Ontology : AmiGOhormone activity  protein binding  extracellular region  extracellular space  endoplasmic reticulum lumen  signal transduction  female pregnancy  memory  adult locomotory behavior  response to glucose  response to selenium ion  response to acidic pH  positive regulation of glucose transport  response to organic cyclic compound  sensory perception of pain  endocrine pancreas development  positive regulation of insulin secretion  response to lipid  secretory granule lumen  exploration behavior  response to drug  response to starvation  neuronal cell body  response to amino acid  response to peptide hormone  positive regulation of cAMP-mediated signaling  response to axon injury  regulation of insulin secretion  digestive system development  long-term synaptic potentiation  positive regulation of glucagon secretion  triglyceride homeostasis  
Ontology : EGO-EBIhormone activity  protein binding  extracellular region  extracellular space  endoplasmic reticulum lumen  signal transduction  female pregnancy  memory  adult locomotory behavior  response to glucose  response to selenium ion  response to acidic pH  positive regulation of glucose transport  response to organic cyclic compound  sensory perception of pain  endocrine pancreas development  positive regulation of insulin secretion  response to lipid  secretory granule lumen  exploration behavior  response to drug  response to starvation  neuronal cell body  response to amino acid  response to peptide hormone  positive regulation of cAMP-mediated signaling  response to axon injury  regulation of insulin secretion  digestive system development  long-term synaptic potentiation  positive regulation of glucagon secretion  triglyceride homeostasis  
Pathways : KEGGInsulin secretion   
NDEx NetworkGIP
Atlas of Cancer Signalling NetworkGIP
Wikipedia pathwaysGIP
Orthology - Evolution
OrthoDB2695
GeneTree (enSembl)ENSG00000159224
Phylogenetic Trees/Animal Genes : TreeFamGIP
HOVERGENP09681
HOGENOMP09681
Homologs : HomoloGeneGIP
Homology/Alignments : Family Browser (UCSC)GIP
Gene fusions - Rearrangements
Fusion : MitelmanFAM222B/GIP [17q11.2/17q21.32]  [t(17;17)(q11;q21)]  
Fusion: TCGAC17orf63 GIP 17q21.32 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGIP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GIP
dbVarGIP
ClinVarGIP
1000_GenomesGIP 
Exome Variant ServerGIP
ExAC (Exome Aggregation Consortium)GIP (select the gene name)
Genetic variants : HAPMAP2695
Genomic Variants (DGV)GIP [DGVbeta]
DECIPHERGIP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGIP 
Mutations
ICGC Data PortalGIP 
TCGA Data PortalGIP 
Broad Tumor PortalGIP
OASIS PortalGIP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGIP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGIP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GIP
DgiDB (Drug Gene Interaction Database)GIP
DoCM (Curated mutations)GIP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GIP (select a term)
intoGenGIP
Cancer3DGIP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM137240   
Orphanet
MedgenGIP
Genetic Testing Registry GIP
NextProtP09681 [Medical]
TSGene2695
GENETestsGIP
Target ValidationGIP
Huge Navigator GIP [HugePedia]
snp3D : Map Gene to Disease2695
BioCentury BCIQGIP
ClinGenGIP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2695
Chemical/Pharm GKB GenePA28681
Clinical trialGIP
Miscellaneous
canSAR (ICR)GIP (select the gene name)
Probes
Litterature
PubMed74 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGIP
EVEXGIP
GoPubMedGIP
iHOPGIP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:09:50 CEST 2017

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