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GIPR (gastric inhibitory polypeptide receptor)

Identity

Other aliasPGQTL2
HGNC (Hugo) GIPR
LocusID (NCBI) 2696
Atlas_Id 51056
Location 19q13.32  [Link to chromosome band 19q13]
Location_base_pair Starts at 45668244 and ends at 45683724 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GIPR (19q13.32) / PRR12 (19q13.33)GIPR 19q13.32 / PRR12 19q13.33

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GIPR   4271
Cards
Entrez_Gene (NCBI)GIPR  2696  gastric inhibitory polypeptide receptor
AliasesPGQTL2
GeneCards (Weizmann)GIPR
Ensembl hg19 (Hinxton)ENSG00000010310 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000010310 [Gene_View]  chr19:45668244-45683724 [Contig_View]  GIPR [Vega]
ICGC DataPortalENSG00000010310
TCGA cBioPortalGIPR
AceView (NCBI)GIPR
Genatlas (Paris)GIPR
WikiGenes2696
SOURCE (Princeton)GIPR
Genetics Home Reference (NIH)GIPR
Genomic and cartography
GoldenPath hg38 (UCSC)GIPR  -     chr19:45668244-45683724 +  19q13.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GIPR  -     19q13.32   [Description]    (hg19-Feb_2009)
EnsemblGIPR - 19q13.32 [CytoView hg19]  GIPR - 19q13.32 [CytoView hg38]
Mapping of homologs : NCBIGIPR [Mapview hg19]  GIPR [Mapview hg38]
OMIM137241   
Gene and transcription
Genbank (Entrez)BC093723 BC095494 BC101673 BC143300 BC143302
RefSeq transcript (Entrez)NM_000164 NM_001308418
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GIPR
Cluster EST : UnigeneHs.658534 [ NCBI ]
CGAP (NCI)Hs.658534
Alternative Splicing GalleryENSG00000010310
Gene ExpressionGIPR [ NCBI-GEO ]   GIPR [ EBI - ARRAY_EXPRESS ]   GIPR [ SEEK ]   GIPR [ MEM ]
Gene Expression Viewer (FireBrowse)GIPR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2696
GTEX Portal (Tissue expression)GIPR
Protein : pattern, domain, 3D structure
UniProt/SwissProtP48546   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP48546  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP48546
Splice isoforms : SwissVarP48546
PhosPhoSitePlusP48546
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F2_1 (PS00649)    G_PROTEIN_RECEP_F2_2 (PS00650)    G_PROTEIN_RECEP_F2_3 (PS50227)    G_PROTEIN_RECEP_F2_4 (PS50261)   
Domains : Interpro (EBI)GPCR_2-like    GPCR_2_extracellular_dom    GPCR_2_GIP_rcpt    GPCR_2_secretin-like    GPCR_2_secretin-like_CS   
Domain families : Pfam (Sanger)7tm_2 (PF00002)    HRM (PF02793)   
Domain families : Pfam (NCBI)pfam00002    pfam02793   
Domain families : Smart (EMBL)HormR (SM00008)  
Conserved Domain (NCBI)GIPR
DMDM Disease mutations2696
Blocks (Seattle)GIPR
PDB (SRS)2QKH    4HJ0   
PDB (PDBSum)2QKH    4HJ0   
PDB (IMB)2QKH    4HJ0   
PDB (RSDB)2QKH    4HJ0   
Structural Biology KnowledgeBase2QKH    4HJ0   
SCOP (Structural Classification of Proteins)2QKH    4HJ0   
CATH (Classification of proteins structures)2QKH    4HJ0   
SuperfamilyP48546
Human Protein AtlasENSG00000010310
Peptide AtlasP48546
HPRD00670
IPIIPI00010172   IPI00218459   IPI00922113   
Protein Interaction databases
DIP (DOE-UCLA)P48546
IntAct (EBI)P48546
FunCoupENSG00000010310
BioGRIDGIPR
STRING (EMBL)GIPR
ZODIACGIPR
Ontologies - Pathways
QuickGOP48546
Ontology : AmiGOdesensitization of G-protein coupled receptor protein signaling pathway  transmembrane signaling receptor activity  plasma membrane  generation of precursor metabolites and energy  cell surface receptor signaling pathway  activation of adenylate cyclase activity  positive regulation of cytosolic calcium ion concentration  response to nutrient  response to glucose  integral component of membrane  gastric inhibitory peptide receptor activity  peptide hormone binding  endocrine pancreas development  positive regulation of insulin secretion  gastric inhibitory peptide signaling pathway  response to axon injury  regulation of insulin secretion  response to calcium ion  response to fatty acid  
Ontology : EGO-EBIdesensitization of G-protein coupled receptor protein signaling pathway  transmembrane signaling receptor activity  plasma membrane  generation of precursor metabolites and energy  cell surface receptor signaling pathway  activation of adenylate cyclase activity  positive regulation of cytosolic calcium ion concentration  response to nutrient  response to glucose  integral component of membrane  gastric inhibitory peptide receptor activity  peptide hormone binding  endocrine pancreas development  positive regulation of insulin secretion  gastric inhibitory peptide signaling pathway  response to axon injury  regulation of insulin secretion  response to calcium ion  response to fatty acid  
Pathways : KEGGNeuroactive ligand-receptor interaction   
NDEx NetworkGIPR
Atlas of Cancer Signalling NetworkGIPR
Wikipedia pathwaysGIPR
Orthology - Evolution
OrthoDB2696
GeneTree (enSembl)ENSG00000010310
Phylogenetic Trees/Animal Genes : TreeFamGIPR
HOVERGENP48546
HOGENOMP48546
Homologs : HomoloGeneGIPR
Homology/Alignments : Family Browser (UCSC)GIPR
Gene fusions - Rearrangements
Fusion : MitelmanGIPR/PRR12 [19q13.32/19q13.33]  
Fusion: TCGAGIPR 19q13.32 PRR12 19q13.33 LUAD
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGIPR [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GIPR
dbVarGIPR
ClinVarGIPR
1000_GenomesGIPR 
Exome Variant ServerGIPR
ExAC (Exome Aggregation Consortium)GIPR (select the gene name)
Genetic variants : HAPMAP2696
Genomic Variants (DGV)GIPR [DGVbeta]
DECIPHERGIPR [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGIPR 
Mutations
ICGC Data PortalGIPR 
TCGA Data PortalGIPR 
Broad Tumor PortalGIPR
OASIS PortalGIPR [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGIPR  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGIPR
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GIPR
DgiDB (Drug Gene Interaction Database)GIPR
DoCM (Curated mutations)GIPR (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GIPR (select a term)
intoGenGIPR
Cancer3DGIPR(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM137241   
Orphanet
MedgenGIPR
Genetic Testing Registry GIPR
NextProtP48546 [Medical]
TSGene2696
GENETestsGIPR
Target ValidationGIPR
Huge Navigator GIPR [HugePedia]
snp3D : Map Gene to Disease2696
BioCentury BCIQGIPR
ClinGenGIPR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2696
Chemical/Pharm GKB GenePA28682
Clinical trialGIPR
Miscellaneous
canSAR (ICR)GIPR (select the gene name)
Probes
Litterature
PubMed65 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGIPR
EVEXGIPR
GoPubMedGIPR
iHOPGIPR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:09:50 CEST 2017

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