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GKN3P (gastrokine 3, pseudogene)

Identity

Other alias-
HGNC (Hugo) GKN3P
LocusID (NCBI) 100132413
Atlas_Id 56236
Location 2p13.3  [Link to chromosome band 2p13]
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)GKN3P   37701
Cards
Entrez_Gene (NCBI)GKN3P  100132413  gastrokine 3, pseudogene
Aliases
GeneCards (Weizmann)GKN3P
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  GKN3P [Vega]
TCGA cBioPortalGKN3P
AceView (NCBI)GKN3P
Genatlas (Paris)GKN3P
WikiGenes100132413
SOURCE (Princeton)GKN3P
Genetics Home Reference (NIH)GKN3P
Genomic and cartography
GoldenPath hg38 (UCSC)GKN3P  -  
GoldenPath hg19 (UCSC)GKN3P  -  
EnsemblGKN3P - [CytoView hg19]  GKN3P - [CytoView hg38]
Mapping of homologs : NCBIGKN3P [Mapview hg19]  GKN3P [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GKN3P
Gene ExpressionGKN3P [ NCBI-GEO ]   GKN3P [ EBI - ARRAY_EXPRESS ]   GKN3P [ SEEK ]   GKN3P [ MEM ]
Gene Expression Viewer (FireBrowse)GKN3P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100132413
GTEX Portal (Tissue expression)GKN3P
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0CG01   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0CG01  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0CG01
Splice isoforms : SwissVarP0CG01
PhosPhoSitePlusP0CG01
Domaine pattern : Prosite (Expaxy)BRICHOS (PS50869)   
Domains : Interpro (EBI)BRICHOS_dom   
Domain families : Pfam (Sanger)BRICHOS (PF04089)   
Domain families : Pfam (NCBI)pfam04089   
Domain families : Smart (EMBL)BRICHOS (SM01039)  
Conserved Domain (NCBI)GKN3P
DMDM Disease mutations100132413
Blocks (Seattle)GKN3P
SuperfamilyP0CG01
Peptide AtlasP0CG01
IPIIPI00887145   
Protein Interaction databases
DIP (DOE-UCLA)P0CG01
IntAct (EBI)P0CG01
BioGRIDGKN3P
STRING (EMBL)GKN3P
ZODIACGKN3P
Ontologies - Pathways
QuickGOP0CG01
Ontology : AmiGOextracellular space  regulation of cell proliferation  
Ontology : EGO-EBIextracellular space  regulation of cell proliferation  
NDEx NetworkGKN3P
Atlas of Cancer Signalling NetworkGKN3P
Wikipedia pathwaysGKN3P
Orthology - Evolution
OrthoDB100132413
Phylogenetic Trees/Animal Genes : TreeFamGKN3P
HOVERGENP0CG01
HOGENOMP0CG01
Homologs : HomoloGeneGKN3P
Homology/Alignments : Family Browser (UCSC)GKN3P
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGKN3P [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GKN3P
dbVarGKN3P
ClinVarGKN3P
1000_GenomesGKN3P 
Exome Variant ServerGKN3P
ExAC (Exome Aggregation Consortium)GKN3P (select the gene name)
Genetic variants : HAPMAP100132413
Genomic Variants (DGV)GKN3P [DGVbeta]
DECIPHERGKN3P [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGKN3P 
Mutations
ICGC Data PortalGKN3P 
TCGA Data PortalGKN3P 
Broad Tumor PortalGKN3P
OASIS PortalGKN3P [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDGKN3P
BioMutasearch GKN3P
DgiDB (Drug Gene Interaction Database)GKN3P
DoCM (Curated mutations)GKN3P (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GKN3P (select a term)
intoGenGKN3P
Cancer3DGKN3P(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGKN3P
Genetic Testing Registry GKN3P
NextProtP0CG01 [Medical]
TSGene100132413
GENETestsGKN3P
Target ValidationGKN3P
Huge Navigator GKN3P [HugePedia]
snp3D : Map Gene to Disease100132413
BioCentury BCIQGKN3P
ClinGenGKN3P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100132413
Clinical trialGKN3P
Miscellaneous
canSAR (ICR)GKN3P (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGKN3P
EVEXGKN3P
GoPubMedGKN3P
iHOPGKN3P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:09:54 CEST 2017

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