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GLB1L (galactosidase beta 1 like)

Identity

Alias_namesgalactosidase, beta 1-like
Alias_symbol (synonym)MGC10771
Other alias-
HGNC (Hugo) GLB1L
LocusID (NCBI) 79411
Atlas_Id 63810
Location 2q35  [Link to chromosome band 2q35]
Location_base_pair Starts at 219236598 and ends at 219245429 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GLB1L   28129
Cards
Entrez_Gene (NCBI)GLB1L  79411  galactosidase beta 1 like
Aliases
GeneCards (Weizmann)GLB1L
Ensembl hg19 (Hinxton)ENSG00000163521 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163521 [Gene_View]  chr2:219236598-219245429 [Contig_View]  GLB1L [Vega]
ICGC DataPortalENSG00000163521
TCGA cBioPortalGLB1L
AceView (NCBI)GLB1L
Genatlas (Paris)GLB1L
WikiGenes79411
SOURCE (Princeton)GLB1L
Genetics Home Reference (NIH)GLB1L
Genomic and cartography
GoldenPath hg38 (UCSC)GLB1L  -     chr2:219236598-219245429 -  2q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GLB1L  -     2q35   [Description]    (hg19-Feb_2009)
EnsemblGLB1L - 2q35 [CytoView hg19]  GLB1L - 2q35 [CytoView hg38]
Mapping of homologs : NCBIGLB1L [Mapview hg19]  GLB1L [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055098 AK074393 AK299404 AK300215 AY358639
RefSeq transcript (Entrez)NM_001286423 NM_001286427 NM_024506
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GLB1L
Cluster EST : UnigeneHs.181173 [ NCBI ]
CGAP (NCI)Hs.181173
Alternative Splicing GalleryENSG00000163521
Gene ExpressionGLB1L [ NCBI-GEO ]   GLB1L [ EBI - ARRAY_EXPRESS ]   GLB1L [ SEEK ]   GLB1L [ MEM ]
Gene Expression Viewer (FireBrowse)GLB1L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79411
GTEX Portal (Tissue expression)GLB1L
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UWU2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UWU2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UWU2
Splice isoforms : SwissVarQ6UWU2
Catalytic activity : Enzyme3.2.1.- [ Enzyme-Expasy ]   3.2.1.-3.2.1.- [ IntEnz-EBI ]   3.2.1.- [ BRENDA ]   3.2.1.- [ KEGG ]   
PhosPhoSitePlusQ6UWU2
Domains : Interpro (EBI)B-gal_1-like    Galactose-bd-like    Gly_Hdrlase_35_cat    Glyco_hydro_catalytic_dom    Glycoside_Hdrlase_35    Glycoside_hydrolase_SF   
Domain families : Pfam (Sanger)Glyco_hydro_35 (PF01301)   
Domain families : Pfam (NCBI)pfam01301   
Conserved Domain (NCBI)GLB1L
DMDM Disease mutations79411
Blocks (Seattle)GLB1L
SuperfamilyQ6UWU2
Human Protein AtlasENSG00000163521
Peptide AtlasQ6UWU2
HPRD11004
IPIIPI00185998   IPI00414585   IPI00917848   IPI00918018   IPI00917601   IPI00916349   IPI00916120   
Protein Interaction databases
DIP (DOE-UCLA)Q6UWU2
IntAct (EBI)Q6UWU2
FunCoupENSG00000163521
BioGRIDGLB1L
STRING (EMBL)GLB1L
ZODIACGLB1L
Ontologies - Pathways
QuickGOQ6UWU2
Ontology : AmiGObeta-galactosidase activity  extracellular space  vacuole  carbohydrate metabolic process  
Ontology : EGO-EBIbeta-galactosidase activity  extracellular space  vacuole  carbohydrate metabolic process  
NDEx NetworkGLB1L
Atlas of Cancer Signalling NetworkGLB1L
Wikipedia pathwaysGLB1L
Orthology - Evolution
OrthoDB79411
GeneTree (enSembl)ENSG00000163521
Phylogenetic Trees/Animal Genes : TreeFamGLB1L
HOVERGENQ6UWU2
HOGENOMQ6UWU2
Homologs : HomoloGeneGLB1L
Homology/Alignments : Family Browser (UCSC)GLB1L
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGLB1L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GLB1L
dbVarGLB1L
ClinVarGLB1L
1000_GenomesGLB1L 
Exome Variant ServerGLB1L
ExAC (Exome Aggregation Consortium)GLB1L (select the gene name)
Genetic variants : HAPMAP79411
Genomic Variants (DGV)GLB1L [DGVbeta]
DECIPHERGLB1L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGLB1L 
Mutations
ICGC Data PortalGLB1L 
TCGA Data PortalGLB1L 
Broad Tumor PortalGLB1L
OASIS PortalGLB1L [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGLB1L  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGLB1L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GLB1L
DgiDB (Drug Gene Interaction Database)GLB1L
DoCM (Curated mutations)GLB1L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GLB1L (select a term)
intoGenGLB1L
Cancer3DGLB1L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGLB1L
Genetic Testing Registry GLB1L
NextProtQ6UWU2 [Medical]
TSGene79411
GENETestsGLB1L
Target ValidationGLB1L
Huge Navigator GLB1L [HugePedia]
snp3D : Map Gene to Disease79411
BioCentury BCIQGLB1L
ClinGenGLB1L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79411
Chemical/Pharm GKB GenePA134885559
Clinical trialGLB1L
Miscellaneous
canSAR (ICR)GLB1L (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGLB1L
EVEXGLB1L
GoPubMedGLB1L
iHOPGLB1L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:09:25 CEST 2017

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