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GLB1L2 (galactosidase beta 1 like 2)

Identity

Alias_namesgalactosidase, beta 1-like 2
Other aliasMST114
MSTP114
HGNC (Hugo) GLB1L2
LocusID (NCBI) 89944
Atlas_Id 63811
Location 11q25  [Link to chromosome band 11q25]
Location_base_pair Starts at 134331874 and ends at 134376324 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ARRDC1 (9q34.3) / GLB1L2 (11q25)FGFR2 (10q26.13) / GLB1L2 (11q25)KDM2A (11q13.2) / GLB1L2 (11q25)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GLB1L2   25129
Cards
Entrez_Gene (NCBI)GLB1L2  89944  galactosidase beta 1 like 2
AliasesMST114; MSTP114
GeneCards (Weizmann)GLB1L2
Ensembl hg19 (Hinxton)ENSG00000149328 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000149328 [Gene_View]  chr11:134331874-134376324 [Contig_View]  GLB1L2 [Vega]
ICGC DataPortalENSG00000149328
TCGA cBioPortalGLB1L2
AceView (NCBI)GLB1L2
Genatlas (Paris)GLB1L2
WikiGenes89944
SOURCE (Princeton)GLB1L2
Genetics Home Reference (NIH)GLB1L2
Genomic and cartography
GoldenPath hg38 (UCSC)GLB1L2  -     chr11:134331874-134376324 +  11q25   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GLB1L2  -     11q25   [Description]    (hg19-Feb_2009)
EnsemblGLB1L2 - 11q25 [CytoView hg19]  GLB1L2 - 11q25 [CytoView hg38]
Mapping of homologs : NCBIGLB1L2 [Mapview hg19]  GLB1L2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF173889 AK074703 AK074750 AK074855 AK074947
RefSeq transcript (Entrez)NM_138342
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GLB1L2
Cluster EST : UnigeneHs.436178 [ NCBI ]
CGAP (NCI)Hs.436178
Alternative Splicing GalleryENSG00000149328
Gene ExpressionGLB1L2 [ NCBI-GEO ]   GLB1L2 [ EBI - ARRAY_EXPRESS ]   GLB1L2 [ SEEK ]   GLB1L2 [ MEM ]
Gene Expression Viewer (FireBrowse)GLB1L2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)89944
GTEX Portal (Tissue expression)GLB1L2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IW92   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IW92  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IW92
Splice isoforms : SwissVarQ8IW92
Catalytic activity : Enzyme3.2.1.- [ Enzyme-Expasy ]   3.2.1.-3.2.1.- [ IntEnz-EBI ]   3.2.1.- [ BRENDA ]   3.2.1.- [ KEGG ]   
PhosPhoSitePlusQ8IW92
Domaine pattern : Prosite (Expaxy)GLYCOSYL_HYDROL_F35 (PS01182)   
Domains : Interpro (EBI)B-gal_1-like    Galactose-bd-like    Gly_Hdrlase_35_cat    Glyco_hydro_35_CS    Glyco_hydro_catalytic_dom    Glycoside_Hdrlase_35    Glycoside_hydrolase_SF   
Domain families : Pfam (Sanger)Glyco_hydro_35 (PF01301)   
Domain families : Pfam (NCBI)pfam01301   
Conserved Domain (NCBI)GLB1L2
DMDM Disease mutations89944
Blocks (Seattle)GLB1L2
SuperfamilyQ8IW92
Human Protein AtlasENSG00000149328
Peptide AtlasQ8IW92
HPRD14265
IPIIPI00293028   IPI00984898   IPI00983311   IPI00983921   
Protein Interaction databases
DIP (DOE-UCLA)Q8IW92
IntAct (EBI)Q8IW92
FunCoupENSG00000149328
BioGRIDGLB1L2
STRING (EMBL)GLB1L2
ZODIACGLB1L2
Ontologies - Pathways
QuickGOQ8IW92
Ontology : AmiGObeta-galactosidase activity  extracellular region  vacuole  carbohydrate metabolic process  
Ontology : EGO-EBIbeta-galactosidase activity  extracellular region  vacuole  carbohydrate metabolic process  
NDEx NetworkGLB1L2
Atlas of Cancer Signalling NetworkGLB1L2
Wikipedia pathwaysGLB1L2
Orthology - Evolution
OrthoDB89944
GeneTree (enSembl)ENSG00000149328
Phylogenetic Trees/Animal Genes : TreeFamGLB1L2
HOVERGENQ8IW92
HOGENOMQ8IW92
Homologs : HomoloGeneGLB1L2
Homology/Alignments : Family Browser (UCSC)GLB1L2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGLB1L2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GLB1L2
dbVarGLB1L2
ClinVarGLB1L2
1000_GenomesGLB1L2 
Exome Variant ServerGLB1L2
ExAC (Exome Aggregation Consortium)GLB1L2 (select the gene name)
Genetic variants : HAPMAP89944
Genomic Variants (DGV)GLB1L2 [DGVbeta]
DECIPHERGLB1L2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGLB1L2 
Mutations
ICGC Data PortalGLB1L2 
TCGA Data PortalGLB1L2 
Broad Tumor PortalGLB1L2
OASIS PortalGLB1L2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGLB1L2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGLB1L2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GLB1L2
DgiDB (Drug Gene Interaction Database)GLB1L2
DoCM (Curated mutations)GLB1L2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GLB1L2 (select a term)
intoGenGLB1L2
Cancer3DGLB1L2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGLB1L2
Genetic Testing Registry GLB1L2
NextProtQ8IW92 [Medical]
TSGene89944
GENETestsGLB1L2
Target ValidationGLB1L2
Huge Navigator GLB1L2 [HugePedia]
snp3D : Map Gene to Disease89944
BioCentury BCIQGLB1L2
ClinGenGLB1L2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD89944
Chemical/Pharm GKB GenePA162389761
Clinical trialGLB1L2
Miscellaneous
canSAR (ICR)GLB1L2 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGLB1L2
EVEXGLB1L2
GoPubMedGLB1L2
iHOPGLB1L2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:50:42 CEST 2017

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