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GLMP (glycosylated lysosomal membrane protein)

Identity

Alias_namesC1orf85
chromosome 1 open reading frame 85
Alias_symbol (synonym)MGC31963
NCU-G1
Other alias
HGNC (Hugo) GLMP
LocusID (NCBI) 112770
Atlas_Id 76629
Location 1q22  [Link to chromosome band 1q22]
Location_base_pair Starts at 156262478 and ends at 156265480 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
GLMP (1q22) / LOC100507412 (-)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)GLMP   29436
Cards
Entrez_Gene (NCBI)GLMP  112770  glycosylated lysosomal membrane protein
AliasesC1orf85; NCU-G1
GeneCards (Weizmann)GLMP
Ensembl hg19 (Hinxton)ENSG00000198715 [Gene_View]  chr1:156262478-156265480 [Contig_View]  GLMP [Vega]
Ensembl hg38 (Hinxton)ENSG00000198715 [Gene_View]  chr1:156262478-156265480 [Contig_View]  GLMP [Vega]
ICGC DataPortalENSG00000198715
TCGA cBioPortalGLMP
AceView (NCBI)GLMP
Genatlas (Paris)GLMP
WikiGenes112770
SOURCE (Princeton)GLMP
Genetics Home Reference (NIH)GLMP
Genomic and cartography
GoldenPath hg19 (UCSC)GLMP  -     chr1:156262478-156265480 -  1q22   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)GLMP  -     1q22   [Description]    (hg38-Dec_2013)
EnsemblGLMP - 1q22 [CytoView hg19]  GLMP - 1q22 [CytoView hg38]
Mapping of homologs : NCBIGLMP [Mapview hg19]  GLMP [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK075349 AK296157 AL528533 AW293248 AY358450
RefSeq transcript (Entrez)NM_001256604 NM_001256605 NM_001256608 NM_001256609 NM_144580
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)GLMP
Cluster EST : UnigeneHs.202522 [ NCBI ]
CGAP (NCI)Hs.202522
Alternative Splicing GalleryENSG00000198715
Gene ExpressionGLMP [ NCBI-GEO ]   GLMP [ EBI - ARRAY_EXPRESS ]   GLMP [ SEEK ]   GLMP [ MEM ]
Gene Expression Viewer (FireBrowse)GLMP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)112770
GTEX Portal (Tissue expression)GLMP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WWB7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WWB7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WWB7
Splice isoforms : SwissVarQ8WWB7
PhosPhoSitePlusQ8WWB7
Domains : Interpro (EBI)NCU-G1   
Domain families : Pfam (Sanger)NCU-G1 (PF15065)   
Domain families : Pfam (NCBI)pfam15065   
Conserved Domain (NCBI)GLMP
DMDM Disease mutations112770
Blocks (Seattle)GLMP
SuperfamilyQ8WWB7
Human Protein AtlasENSG00000198715
Peptide AtlasQ8WWB7
HPRD14544
IPIIPI00647672   IPI00943688   IPI00514585   
Protein Interaction databases
DIP (DOE-UCLA)Q8WWB7
IntAct (EBI)Q8WWB7
FunCoupENSG00000198715
BioGRIDGLMP
STRING (EMBL)GLMP
ZODIACGLMP
Ontologies - Pathways
QuickGOQ8WWB7
Ontology : AmiGOsequence-specific DNA binding transcription factor activity  ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity  nucleus  lysosome  lysosomal membrane  cytosol  integral component of membrane  ligand-dependent nuclear receptor transcription coactivator activity  intracellular receptor signaling pathway  transcription regulatory region DNA binding  positive regulation of transcription from RNA polymerase II promoter  
Ontology : EGO-EBIsequence-specific DNA binding transcription factor activity  ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity  nucleus  lysosome  lysosomal membrane  cytosol  integral component of membrane  ligand-dependent nuclear receptor transcription coactivator activity  intracellular receptor signaling pathway  transcription regulatory region DNA binding  positive regulation of transcription from RNA polymerase II promoter  
NDEx NetworkGLMP
Atlas of Cancer Signalling NetworkGLMP
Wikipedia pathwaysGLMP
Orthology - Evolution
OrthoDB112770
GeneTree (enSembl)ENSG00000198715
Phylogenetic Trees/Animal Genes : TreeFamGLMP
HOVERGENQ8WWB7
HOGENOMQ8WWB7
Homologs : HomoloGeneGLMP
Homology/Alignments : Family Browser (UCSC)GLMP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGLMP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GLMP
dbVarGLMP
ClinVarGLMP
1000_GenomesGLMP 
Exome Variant ServerGLMP
ExAC (Exome Aggregation Consortium)GLMP (select the gene name)
Genetic variants : HAPMAP112770
Genomic Variants (DGV)GLMP [DGVbeta]
DECIPHER (Syndromes)1:156262478-156265480  ENSG00000198715
CONAN: Copy Number AnalysisGLMP 
Mutations
ICGC Data PortalGLMP 
TCGA Data PortalGLMP 
Broad Tumor PortalGLMP
OASIS PortalGLMP [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDGLMP
BioMutasearch GLMP
DgiDB (Drug Gene Interaction Database)GLMP
DoCM (Curated mutations)GLMP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GLMP (select a term)
intoGenGLMP
Cancer3DGLMP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGLMP
Genetic Testing Registry GLMP
NextProtQ8WWB7 [Medical]
TSGene112770
GENETestsGLMP
Huge Navigator GLMP [HugePedia]
snp3D : Map Gene to Disease112770
BioCentury BCIQGLMP
ClinGenGLMP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD112770
Chemical/Pharm GKB GenePA142672533
Clinical trialGLMP
Miscellaneous
canSAR (ICR)GLMP (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGLMP
EVEXGLMP
GoPubMedGLMP
iHOPGLMP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:06:13 CET 2017

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