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GLOD4 (glyoxalase domain containing 4)

Identity

Alias (NCBI)C17orf25
CGI-150
HC71
HGNC (Hugo) GLOD4
HGNC Alias symbCGI-150
HC71
HGNC Previous nameC17orf25
HGNC Previous namechromosome 17 open reading frame 25
LocusID (NCBI) 51031
Atlas_Id 63822
Location 17p13.3  [Link to chromosome band 17p13]
Location_base_pair Starts at 759309 and ends at 782331 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ABR (17p13.3)::GLOD4 (17p13.3)FCHSD2 (11q13.4)::GLOD4 (17p13.3)GLOD4 (17p13.3)::GLOD4 (17p13.3)
NUP160 (11p11.2)::GLOD4 (17p13.3)NXN (17p13.3)::GLOD4 (17p13.3)VPS53 (17p13.3)::GLOD4 (17p13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)GLOD4   14111
Cards
Entrez_Gene (NCBI)GLOD4    glyoxalase domain containing 4
AliasesC17orf25; CGI-150; HC71
GeneCards (Weizmann)GLOD4
Ensembl hg19 (Hinxton)ENSG00000167699 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167699 [Gene_View]  ENSG00000167699 [Sequence]  chr17:759309-782331 [Contig_View]  GLOD4 [Vega]
ICGC DataPortalENSG00000167699
TCGA cBioPortalGLOD4
AceView (NCBI)GLOD4
Genatlas (Paris)GLOD4
SOURCE (Princeton)GLOD4
Genetics Home Reference (NIH)GLOD4
Genomic and cartography
GoldenPath hg38 (UCSC)GLOD4  -     chr17:759309-782331 -  17p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GLOD4  -     17p13.3   [Description]    (hg19-Feb_2009)
GoldenPathGLOD4 - 17p13.3 [CytoView hg19]  GLOD4 - 17p13.3 [CytoView hg38]
ImmunoBaseENSG00000167699
Genome Data Viewer NCBIGLOD4 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA721638 AF061730 AF151908 AF177342 AF177343
RefSeq transcript (Entrez)NM_001366247 NM_001366248 NM_001366249 NM_001366250 NM_001389725 NM_001389726 NM_001389727 NM_001389728 NM_001389729 NM_001389730 NM_001389731 NM_001389732 NM_001389733 NM_001389734 NM_001389735 NM_001389736 NM_016080
Consensus coding sequences : CCDS (NCBI)GLOD4
Gene ExpressionGLOD4 [ NCBI-GEO ]   GLOD4 [ EBI - ARRAY_EXPRESS ]   GLOD4 [ SEEK ]   GLOD4 [ MEM ]
Gene Expression Viewer (FireBrowse)GLOD4 [ Firebrowse - Broad ]
GenevisibleExpression of GLOD4 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51031
GTEX Portal (Tissue expression)GLOD4
Human Protein AtlasENSG00000167699-GLOD4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HC38   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HC38  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HC38
PhosPhoSitePlusQ9HC38
Domaine pattern : Prosite (Expaxy)VOC (PS51819)   
Domains : Interpro (EBI)GLOD4    GLOD4_C    Glyas_Bleomycin-R_OHBP_Dase    VOC   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GLOD4
PDB (RSDB)3ZI1   
PDB Europe3ZI1   
PDB (PDBSum)3ZI1   
PDB (IMB)3ZI1   
Structural Biology KnowledgeBase3ZI1   
SCOP (Structural Classification of Proteins)3ZI1   
CATH (Classification of proteins structures)3ZI1   
SuperfamilyQ9HC38
AlphaFold pdb e-kbQ9HC38   
Human Protein Atlas [tissue]ENSG00000167699-GLOD4 [tissue]
HPRD12678
Protein Interaction databases
DIP (DOE-UCLA)Q9HC38
IntAct (EBI)Q9HC38
BioGRIDGLOD4
STRING (EMBL)GLOD4
ZODIACGLOD4
Ontologies - Pathways
QuickGOQ9HC38
Ontology : AmiGOmitochondrion  cadherin binding  extracellular exosome  
Ontology : EGO-EBImitochondrion  cadherin binding  extracellular exosome  
NDEx NetworkGLOD4
Atlas of Cancer Signalling NetworkGLOD4
Wikipedia pathwaysGLOD4
Orthology - Evolution
OrthoDB51031
GeneTree (enSembl)ENSG00000167699
Phylogenetic Trees/Animal Genes : TreeFamGLOD4
Homologs : HomoloGeneGLOD4
Homology/Alignments : Family Browser (UCSC)GLOD4
Gene fusions - Rearrangements
Fusion : QuiverGLOD4
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGLOD4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GLOD4
dbVarGLOD4
ClinVarGLOD4
MonarchGLOD4
1000_GenomesGLOD4 
Exome Variant ServerGLOD4
GNOMAD BrowserENSG00000167699
Varsome BrowserGLOD4
ACMGGLOD4 variants
VarityQ9HC38
Genomic Variants (DGV)GLOD4 [DGVbeta]
DECIPHERGLOD4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGLOD4 
Mutations
ICGC Data PortalGLOD4 
TCGA Data PortalGLOD4 
Broad Tumor PortalGLOD4
OASIS PortalGLOD4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGLOD4  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DGLOD4
Mutations and Diseases : HGMDGLOD4
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaGLOD4
DgiDB (Drug Gene Interaction Database)GLOD4
DoCM (Curated mutations)GLOD4
CIViC (Clinical Interpretations of Variants in Cancer)GLOD4
Cancer3DGLOD4
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETGLOD4
MedgenGLOD4
Genetic Testing Registry GLOD4
NextProtQ9HC38 [Medical]
GENETestsGLOD4
Target ValidationGLOD4
Huge Navigator GLOD4 [HugePedia]
ClinGenGLOD4
Clinical trials, drugs, therapy
MyCancerGenomeGLOD4
Protein Interactions : CTDGLOD4
Pharm GKB GenePA162389795
PharosQ9HC38
Clinical trialGLOD4
Miscellaneous
canSAR (ICR)GLOD4
HarmonizomeGLOD4
ARCHS4GLOD4
DataMed IndexGLOD4
Probes
Litterature
PubMed27 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXGLOD4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 20 13:20:30 CET 2022

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