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GLOD5 (glyoxalase domain containing 5)

Identity

Other alias-
HGNC (Hugo) GLOD5
LocusID (NCBI) 392465
Atlas_Id 63823
Location Xp11.23  [Link to chromosome band Xp11]
Location_base_pair Starts at 48761750 and ends at 48773648 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GLOD5   33358
Cards
Entrez_Gene (NCBI)GLOD5  392465  glyoxalase domain containing 5
Aliases
GeneCards (Weizmann)GLOD5
Ensembl hg19 (Hinxton)ENSG00000171433 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171433 [Gene_View]  chrX:48761750-48773648 [Contig_View]  GLOD5 [Vega]
ICGC DataPortalENSG00000171433
TCGA cBioPortalGLOD5
AceView (NCBI)GLOD5
Genatlas (Paris)GLOD5
WikiGenes392465
SOURCE (Princeton)GLOD5
Genetics Home Reference (NIH)GLOD5
Genomic and cartography
GoldenPath hg38 (UCSC)GLOD5  -     chrX:48761750-48773648 +  Xp11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GLOD5  -     Xp11.23   [Description]    (hg19-Feb_2009)
EnsemblGLOD5 - Xp11.23 [CytoView hg19]  GLOD5 - Xp11.23 [CytoView hg38]
Mapping of homologs : NCBIGLOD5 [Mapview hg19]  GLOD5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI458936 BC067236 DY655159
RefSeq transcript (Entrez)NM_001080489
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GLOD5
Cluster EST : UnigeneHs.437539 [ NCBI ]
CGAP (NCI)Hs.437539
Alternative Splicing GalleryENSG00000171433
Gene ExpressionGLOD5 [ NCBI-GEO ]   GLOD5 [ EBI - ARRAY_EXPRESS ]   GLOD5 [ SEEK ]   GLOD5 [ MEM ]
Gene Expression Viewer (FireBrowse)GLOD5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)392465
GTEX Portal (Tissue expression)GLOD5
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NK44   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NK44  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NK44
Splice isoforms : SwissVarA6NK44
PhosPhoSitePlusA6NK44
Domaine pattern : Prosite (Expaxy)VOC (PS51819)   
Domains : Interpro (EBI)Glyas_Bleomycin-R_OHBP_Dase    Glyas_Fos-R_dOase_dom   
Domain families : Pfam (Sanger)Glyoxalase (PF00903)   
Domain families : Pfam (NCBI)pfam00903   
Conserved Domain (NCBI)GLOD5
DMDM Disease mutations392465
Blocks (Seattle)GLOD5
PDB (SRS)3ZW5   
PDB (PDBSum)3ZW5   
PDB (IMB)3ZW5   
PDB (RSDB)3ZW5   
Structural Biology KnowledgeBase3ZW5   
SCOP (Structural Classification of Proteins)3ZW5   
CATH (Classification of proteins structures)3ZW5   
SuperfamilyA6NK44
Human Protein AtlasENSG00000171433
Peptide AtlasA6NK44
IPIIPI00376819   
Protein Interaction databases
DIP (DOE-UCLA)A6NK44
IntAct (EBI)A6NK44
FunCoupENSG00000171433
BioGRIDGLOD5
STRING (EMBL)GLOD5
ZODIACGLOD5
Ontologies - Pathways
QuickGOA6NK44
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkGLOD5
Atlas of Cancer Signalling NetworkGLOD5
Wikipedia pathwaysGLOD5
Orthology - Evolution
OrthoDB392465
GeneTree (enSembl)ENSG00000171433
Phylogenetic Trees/Animal Genes : TreeFamGLOD5
HOVERGENA6NK44
HOGENOMA6NK44
Homologs : HomoloGeneGLOD5
Homology/Alignments : Family Browser (UCSC)GLOD5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGLOD5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GLOD5
dbVarGLOD5
ClinVarGLOD5
1000_GenomesGLOD5 
Exome Variant ServerGLOD5
ExAC (Exome Aggregation Consortium)GLOD5 (select the gene name)
Genetic variants : HAPMAP392465
Genomic Variants (DGV)GLOD5 [DGVbeta]
DECIPHERGLOD5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGLOD5 
Mutations
ICGC Data PortalGLOD5 
TCGA Data PortalGLOD5 
Broad Tumor PortalGLOD5
OASIS PortalGLOD5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGLOD5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGLOD5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch GLOD5
DgiDB (Drug Gene Interaction Database)GLOD5
DoCM (Curated mutations)GLOD5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GLOD5 (select a term)
intoGenGLOD5
Cancer3DGLOD5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGLOD5
Genetic Testing Registry GLOD5
NextProtA6NK44 [Medical]
TSGene392465
GENETestsGLOD5
Target ValidationGLOD5
Huge Navigator GLOD5 [HugePedia]
snp3D : Map Gene to Disease392465
BioCentury BCIQGLOD5
ClinGenGLOD5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD392465
Chemical/Pharm GKB GenePA162389818
Clinical trialGLOD5
Miscellaneous
canSAR (ICR)GLOD5 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGLOD5
EVEXGLOD5
GoPubMedGLOD5
iHOPGLOD5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:50:44 CEST 2017

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