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GLP2R (glucagon like peptide 2 receptor)

Identity

Alias_namesglucagon-like peptide 2 receptor
Other alias-
HGNC (Hugo) GLP2R
LocusID (NCBI) 9340
Atlas_Id 50507
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 9825551 and ends at 9892103 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)GLP2R   4325
Cards
Entrez_Gene (NCBI)GLP2R  9340  glucagon like peptide 2 receptor
Aliases
GeneCards (Weizmann)GLP2R
Ensembl hg19 (Hinxton)ENSG00000065325 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000065325 [Gene_View]  chr17:9825551-9892103 [Contig_View]  GLP2R [Vega]
ICGC DataPortalENSG00000065325
TCGA cBioPortalGLP2R
AceView (NCBI)GLP2R
Genatlas (Paris)GLP2R
WikiGenes9340
SOURCE (Princeton)GLP2R
Genetics Home Reference (NIH)GLP2R
Genomic and cartography
GoldenPath hg38 (UCSC)GLP2R  -     chr17:9825551-9892103 +  17p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GLP2R  -     17p13.1   [Description]    (hg19-Feb_2009)
EnsemblGLP2R - 17p13.1 [CytoView hg19]  GLP2R - 17p13.1 [CytoView hg38]
Mapping of homologs : NCBIGLP2R [Mapview hg19]  GLP2R [Mapview hg38]
OMIM603659   
Gene and transcription
Genbank (Entrez)AF105367 AK295765 AK307283 AK314269 BC019818
RefSeq transcript (Entrez)NM_004246
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GLP2R
Cluster EST : UnigeneHs.248202 [ NCBI ]
CGAP (NCI)Hs.248202
Alternative Splicing GalleryENSG00000065325
Gene ExpressionGLP2R [ NCBI-GEO ]   GLP2R [ EBI - ARRAY_EXPRESS ]   GLP2R [ SEEK ]   GLP2R [ MEM ]
Gene Expression Viewer (FireBrowse)GLP2R [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9340
GTEX Portal (Tissue expression)GLP2R
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95838   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95838  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95838
Splice isoforms : SwissVarO95838
PhosPhoSitePlusO95838
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F2_1 (PS00649)    G_PROTEIN_RECEP_F2_3 (PS50227)    G_PROTEIN_RECEP_F2_4 (PS50261)   
Domains : Interpro (EBI)GPCR_2-like    GPCR_2_extracellular_dom    GPCR_2_secretin-like    GPCR_2_secretin-like_CS   
Domain families : Pfam (Sanger)7tm_2 (PF00002)    HRM (PF02793)   
Domain families : Pfam (NCBI)pfam00002    pfam02793   
Domain families : Smart (EMBL)HormR (SM00008)  
Conserved Domain (NCBI)GLP2R
DMDM Disease mutations9340
Blocks (Seattle)GLP2R
SuperfamilyO95838
Human Protein AtlasENSG00000065325
Peptide AtlasO95838
HPRD04713
IPIIPI00873212   IPI00291261   IPI01021584   
Protein Interaction databases
DIP (DOE-UCLA)O95838
IntAct (EBI)O95838
FunCoupENSG00000065325
BioGRIDGLP2R
STRING (EMBL)GLP2R
ZODIACGLP2R
Ontologies - Pathways
QuickGOO95838
Ontology : AmiGOG-protein coupled receptor activity  glucagon receptor activity  plasma membrane  cell surface receptor signaling pathway  adenylate cyclase-modulating G-protein coupled receptor signaling pathway  positive regulation of cell proliferation  integral component of membrane  cellular response to glucagon stimulus  
Ontology : EGO-EBIG-protein coupled receptor activity  glucagon receptor activity  plasma membrane  cell surface receptor signaling pathway  adenylate cyclase-modulating G-protein coupled receptor signaling pathway  positive regulation of cell proliferation  integral component of membrane  cellular response to glucagon stimulus  
Pathways : KEGGNeuroactive ligand-receptor interaction   
NDEx NetworkGLP2R
Atlas of Cancer Signalling NetworkGLP2R
Wikipedia pathwaysGLP2R
Orthology - Evolution
OrthoDB9340
GeneTree (enSembl)ENSG00000065325
Phylogenetic Trees/Animal Genes : TreeFamGLP2R
HOVERGENO95838
HOGENOMO95838
Homologs : HomoloGeneGLP2R
Homology/Alignments : Family Browser (UCSC)GLP2R
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGLP2R [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GLP2R
dbVarGLP2R
ClinVarGLP2R
1000_GenomesGLP2R 
Exome Variant ServerGLP2R
ExAC (Exome Aggregation Consortium)GLP2R (select the gene name)
Genetic variants : HAPMAP9340
Genomic Variants (DGV)GLP2R [DGVbeta]
DECIPHERGLP2R [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGLP2R 
Mutations
ICGC Data PortalGLP2R 
TCGA Data PortalGLP2R 
Broad Tumor PortalGLP2R
OASIS PortalGLP2R [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGLP2R  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGLP2R
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GLP2R
DgiDB (Drug Gene Interaction Database)GLP2R
DoCM (Curated mutations)GLP2R (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GLP2R (select a term)
intoGenGLP2R
Cancer3DGLP2R(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603659   
Orphanet
MedgenGLP2R
Genetic Testing Registry GLP2R
NextProtO95838 [Medical]
TSGene9340
GENETestsGLP2R
Target ValidationGLP2R
Huge Navigator GLP2R [HugePedia]
snp3D : Map Gene to Disease9340
BioCentury BCIQGLP2R
ClinGenGLP2R
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9340
Chemical/Pharm GKB GenePA28726
Clinical trialGLP2R
Miscellaneous
canSAR (ICR)GLP2R (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGLP2R
EVEXGLP2R
GoPubMedGLP2R
iHOPGLP2R
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:35:24 CEST 2017
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