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GMFB (glia maturation factor beta)

Identity

Alias_symbol (synonym)GMF
Other alias
HGNC (Hugo) GMFB
LocusID (NCBI) 2764
Atlas_Id 63852
Location 14q22.2  [Link to chromosome band 14q22]
Location_base_pair Starts at 54474491 and ends at 54489026 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CCND1 (11q13.3) / GMFB (14q22.2)SFT2D1 (6q27) / GMFB (14q22.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GMFB   4373
Cards
Entrez_Gene (NCBI)GMFB  2764  glia maturation factor beta
AliasesGMF
GeneCards (Weizmann)GMFB
Ensembl hg19 (Hinxton)ENSG00000197045 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197045 [Gene_View]  chr14:54474491-54489026 [Contig_View]  GMFB [Vega]
ICGC DataPortalENSG00000197045
TCGA cBioPortalGMFB
AceView (NCBI)GMFB
Genatlas (Paris)GMFB
WikiGenes2764
SOURCE (Princeton)GMFB
Genetics Home Reference (NIH)GMFB
Genomic and cartography
GoldenPath hg38 (UCSC)GMFB  -     chr14:54474491-54489026 -  14q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GMFB  -     14q22.2   [Description]    (hg19-Feb_2009)
EnsemblGMFB - 14q22.2 [CytoView hg19]  GMFB - 14q22.2 [CytoView hg38]
Mapping of homologs : NCBIGMFB [Mapview hg19]  GMFB [Mapview hg38]
OMIM601713   
Gene and transcription
Genbank (Entrez)AB001106 AB209240 AI342496 AK311753 BC005359
RefSeq transcript (Entrez)NM_004124
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GMFB
Cluster EST : UnigeneHs.151413 [ NCBI ]
CGAP (NCI)Hs.151413
Alternative Splicing GalleryENSG00000197045
Gene ExpressionGMFB [ NCBI-GEO ]   GMFB [ EBI - ARRAY_EXPRESS ]   GMFB [ SEEK ]   GMFB [ MEM ]
Gene Expression Viewer (FireBrowse)GMFB [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2764
GTEX Portal (Tissue expression)GMFB
Protein : pattern, domain, 3D structure
UniProt/SwissProtP60983   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP60983  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP60983
Splice isoforms : SwissVarP60983
PhosPhoSitePlusP60983
Domaine pattern : Prosite (Expaxy)ADF_H (PS51263)   
Domains : Interpro (EBI)ADF-H    ADF-H/Gelsolin-like_dom    GMF   
Domain families : Pfam (Sanger)Cofilin_ADF (PF00241)   
Domain families : Pfam (NCBI)pfam00241   
Domain families : Smart (EMBL)ADF (SM00102)  
Conserved Domain (NCBI)GMFB
DMDM Disease mutations2764
Blocks (Seattle)GMFB
SuperfamilyP60983
Human Protein AtlasENSG00000197045
Peptide AtlasP60983
IPIIPI00978910   IPI00555789   IPI00412987   IPI01025296   IPI01026093   
Protein Interaction databases
DIP (DOE-UCLA)P60983
IntAct (EBI)P60983
FunCoupENSG00000197045
BioGRIDGMFB
STRING (EMBL)GMFB
ZODIACGMFB
Ontologies - Pathways
QuickGOP60983
Ontology : AmiGOactin binding  protein kinase inhibitor activity  signal transducer activity  intracellular  protein phosphorylation  negative regulation of protein kinase activity  signal transduction  nervous system development  learning  locomotory behavior  enzyme activator activity  growth factor activity  negative regulation of Arp2/3 complex-mediated actin nucleation  positive regulation of catalytic activity  Arp2/3 complex binding  
Ontology : EGO-EBIactin binding  protein kinase inhibitor activity  signal transducer activity  intracellular  protein phosphorylation  negative regulation of protein kinase activity  signal transduction  nervous system development  learning  locomotory behavior  enzyme activator activity  growth factor activity  negative regulation of Arp2/3 complex-mediated actin nucleation  positive regulation of catalytic activity  Arp2/3 complex binding  
NDEx NetworkGMFB
Atlas of Cancer Signalling NetworkGMFB
Wikipedia pathwaysGMFB
Orthology - Evolution
OrthoDB2764
GeneTree (enSembl)ENSG00000197045
Phylogenetic Trees/Animal Genes : TreeFamGMFB
HOVERGENP60983
HOGENOMP60983
Homologs : HomoloGeneGMFB
Homology/Alignments : Family Browser (UCSC)GMFB
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGMFB [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GMFB
dbVarGMFB
ClinVarGMFB
1000_GenomesGMFB 
Exome Variant ServerGMFB
ExAC (Exome Aggregation Consortium)GMFB (select the gene name)
Genetic variants : HAPMAP2764
Genomic Variants (DGV)GMFB [DGVbeta]
DECIPHERGMFB [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGMFB 
Mutations
ICGC Data PortalGMFB 
TCGA Data PortalGMFB 
Broad Tumor PortalGMFB
OASIS PortalGMFB [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGMFB  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGMFB
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GMFB
DgiDB (Drug Gene Interaction Database)GMFB
DoCM (Curated mutations)GMFB (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GMFB (select a term)
intoGenGMFB
Cancer3DGMFB(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601713   
Orphanet
MedgenGMFB
Genetic Testing Registry GMFB
NextProtP60983 [Medical]
TSGene2764
GENETestsGMFB
Target ValidationGMFB
Huge Navigator GMFB [HugePedia]
snp3D : Map Gene to Disease2764
BioCentury BCIQGMFB
ClinGenGMFB
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2764
Chemical/Pharm GKB GenePA28758
Clinical trialGMFB
Miscellaneous
canSAR (ICR)GMFB (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGMFB
EVEXGMFB
GoPubMedGMFB
iHOPGMFB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:50:51 CEST 2017

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