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GMNC (geminin coiled-coil domain containing)

Identity

Alias_symbol (synonym)GEMC1
Other alias
HGNC (Hugo) GMNC
LocusID (NCBI) 647309
Atlas_Id 56592
Location 3q28  [Link to chromosome band 3q28]
Location_base_pair Starts at 190852737 and ends at 190862676 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GMNC   40049
Cards
Entrez_Gene (NCBI)GMNC  647309  geminin coiled-coil domain containing
AliasesGEMC1
GeneCards (Weizmann)GMNC
Ensembl hg19 (Hinxton)ENSG00000205835 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205835 [Gene_View]  chr3:190852737-190862676 [Contig_View]  GMNC [Vega]
ICGC DataPortalENSG00000205835
TCGA cBioPortalGMNC
AceView (NCBI)GMNC
Genatlas (Paris)GMNC
WikiGenes647309
SOURCE (Princeton)GMNC
Genetics Home Reference (NIH)GMNC
Genomic and cartography
GoldenPath hg38 (UCSC)GMNC  -     chr3:190852737-190862676 -  3q28   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GMNC  -     3q28   [Description]    (hg19-Feb_2009)
EnsemblGMNC - 3q28 [CytoView hg19]  GMNC - 3q28 [CytoView hg38]
Mapping of homologs : NCBIGMNC [Mapview hg19]  GMNC [Mapview hg38]
OMIM614448   
Gene and transcription
Genbank (Entrez)BC031680 CR749823
RefSeq transcript (Entrez)NM_001146686
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GMNC
Cluster EST : UnigeneHs.518490 [ NCBI ]
CGAP (NCI)Hs.518490
Alternative Splicing GalleryENSG00000205835
Gene ExpressionGMNC [ NCBI-GEO ]   GMNC [ EBI - ARRAY_EXPRESS ]   GMNC [ SEEK ]   GMNC [ MEM ]
Gene Expression Viewer (FireBrowse)GMNC [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)647309
GTEX Portal (Tissue expression)GMNC
Human Protein AtlasENSG00000205835-GMNC [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NCL1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NCL1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NCL1
Splice isoforms : SwissVarA6NCL1
PhosPhoSitePlusA6NCL1
Domains : Interpro (EBI)GEMC1   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GMNC
DMDM Disease mutations647309
Blocks (Seattle)GMNC
PDB (SRS)5C9N   
PDB (PDBSum)5C9N   
PDB (IMB)5C9N   
PDB (RSDB)5C9N   
Structural Biology KnowledgeBase5C9N   
SCOP (Structural Classification of Proteins)5C9N   
CATH (Classification of proteins structures)5C9N   
SuperfamilyA6NCL1
Human Protein Atlas [tissue]ENSG00000205835-GMNC [tissue]
Peptide AtlasA6NCL1
IPIIPI00741960   IPI00926580   
Protein Interaction databases
DIP (DOE-UCLA)A6NCL1
IntAct (EBI)A6NCL1
FunCoupENSG00000205835
BioGRIDGMNC
STRING (EMBL)GMNC
ZODIACGMNC
Ontologies - Pathways
QuickGOA6NCL1
Ontology : AmiGOchromatin binding  nucleus  DNA replication initiation  cell cycle  cell proliferation  cilium assembly  
Ontology : EGO-EBIchromatin binding  nucleus  DNA replication initiation  cell cycle  cell proliferation  cilium assembly  
NDEx NetworkGMNC
Atlas of Cancer Signalling NetworkGMNC
Wikipedia pathwaysGMNC
Orthology - Evolution
OrthoDB647309
GeneTree (enSembl)ENSG00000205835
Phylogenetic Trees/Animal Genes : TreeFamGMNC
HOVERGENA6NCL1
HOGENOMA6NCL1
Homologs : HomoloGeneGMNC
Homology/Alignments : Family Browser (UCSC)GMNC
Gene fusions - Rearrangements
Tumor Fusion PortalGMNC
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGMNC [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GMNC
dbVarGMNC
ClinVarGMNC
1000_GenomesGMNC 
Exome Variant ServerGMNC
ExAC (Exome Aggregation Consortium)ENSG00000205835
GNOMAD BrowserENSG00000205835
Genetic variants : HAPMAP647309
Genomic Variants (DGV)GMNC [DGVbeta]
DECIPHERGMNC [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGMNC 
Mutations
ICGC Data PortalGMNC 
TCGA Data PortalGMNC 
Broad Tumor PortalGMNC
OASIS PortalGMNC [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGMNC  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGMNC
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GMNC
DgiDB (Drug Gene Interaction Database)GMNC
DoCM (Curated mutations)GMNC (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GMNC (select a term)
intoGenGMNC
Cancer3DGMNC(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614448   
Orphanet
DisGeNETGMNC
MedgenGMNC
Genetic Testing Registry GMNC
NextProtA6NCL1 [Medical]
TSGene647309
GENETestsGMNC
Target ValidationGMNC
Huge Navigator GMNC [HugePedia]
snp3D : Map Gene to Disease647309
BioCentury BCIQGMNC
ClinGenGMNC
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD647309
Chemical/Pharm GKB GenePA166049067
Clinical trialGMNC
Miscellaneous
canSAR (ICR)GMNC (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGMNC
EVEXGMNC
GoPubMedGMNC
iHOPGMNC
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:14:47 CET 2017

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