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GNG10 (G protein subunit gamma 10)

Identity

Alias_namesguanine nucleotide binding protein (G protein)
Other alias-
HGNC (Hugo) GNG10
LocusID (NCBI) 2790
Atlas_Id 43289
Location 9q31.3  [Link to chromosome band 9q31]
Location_base_pair Starts at 111661571 and ends at 111670246 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
DNAJC25 (9q31.3) / GNG10 (9q31.3)GNG10 (9q31.3) / UGCG (9q31.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GNG10   4402
Cards
Entrez_Gene (NCBI)GNG10  2790  G protein subunit gamma 10
Aliases
GeneCards (Weizmann)GNG10
Ensembl hg19 (Hinxton)ENSG00000242616 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000242616 [Gene_View]  chr9:111661571-111670246 [Contig_View]  GNG10 [Vega]
ICGC DataPortalENSG00000242616
TCGA cBioPortalGNG10
AceView (NCBI)GNG10
Genatlas (Paris)GNG10
WikiGenes2790
SOURCE (Princeton)GNG10
Genetics Home Reference (NIH)GNG10
Genomic and cartography
GoldenPath hg38 (UCSC)GNG10  -     chr9:111661571-111670246 +  9q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GNG10  -     9q31.3   [Description]    (hg19-Feb_2009)
EnsemblGNG10 - 9q31.3 [CytoView hg19]  GNG10 - 9q31.3 [CytoView hg38]
Mapping of homologs : NCBIGNG10 [Mapview hg19]  GNG10 [Mapview hg38]
OMIM604389   
Gene and transcription
Genbank (Entrez)AF493877 AW583403 BC010384 BC015206 BC016319
RefSeq transcript (Entrez)NM_001017998 NM_001198664
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GNG10
Cluster EST : UnigeneHs.732002 [ NCBI ]
CGAP (NCI)Hs.732002
Alternative Splicing GalleryENSG00000242616
Gene ExpressionGNG10 [ NCBI-GEO ]   GNG10 [ EBI - ARRAY_EXPRESS ]   GNG10 [ SEEK ]   GNG10 [ MEM ]
Gene Expression Viewer (FireBrowse)GNG10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2790
GTEX Portal (Tissue expression)GNG10
Protein : pattern, domain, 3D structure
UniProt/SwissProtP50151   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP50151  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP50151
Splice isoforms : SwissVarP50151
PhosPhoSitePlusP50151
Domaine pattern : Prosite (Expaxy)G_PROTEIN_GAMMA (PS50058)   
Domains : Interpro (EBI)G-protein_gamma-like_dom    Gprotein-gamma   
Domain families : Pfam (Sanger)G-gamma (PF00631)   
Domain families : Pfam (NCBI)pfam00631   
Domain families : Smart (EMBL)GGL (SM00224)  
Conserved Domain (NCBI)GNG10
DMDM Disease mutations2790
Blocks (Seattle)GNG10
SuperfamilyP50151
Human Protein AtlasENSG00000242616
Peptide AtlasP50151
IPIIPI00030059   
Protein Interaction databases
DIP (DOE-UCLA)P50151
IntAct (EBI)P50151
FunCoupENSG00000242616
BioGRIDGNG10
STRING (EMBL)GNG10
ZODIACGNG10
Ontologies - Pathways
QuickGOP50151
Ontology : AmiGOGTPase activity  signal transducer activity  protein binding  heterotrimeric G-protein complex  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  extracellular exosome  cellular response to glucagon stimulus  
Ontology : EGO-EBIGTPase activity  signal transducer activity  protein binding  heterotrimeric G-protein complex  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  extracellular exosome  cellular response to glucagon stimulus  
Pathways : KEGG   
NDEx NetworkGNG10
Atlas of Cancer Signalling NetworkGNG10
Wikipedia pathwaysGNG10
Orthology - Evolution
OrthoDB2790
GeneTree (enSembl)ENSG00000242616
Phylogenetic Trees/Animal Genes : TreeFamGNG10
HOVERGENP50151
HOGENOMP50151
Homologs : HomoloGeneGNG10
Homology/Alignments : Family Browser (UCSC)GNG10
Gene fusions - Rearrangements
Fusion : MitelmanGNG10/UGCG [9q31.3/9q31.3]  
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGNG10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GNG10
dbVarGNG10
ClinVarGNG10
1000_GenomesGNG10 
Exome Variant ServerGNG10
ExAC (Exome Aggregation Consortium)GNG10 (select the gene name)
Genetic variants : HAPMAP2790
Genomic Variants (DGV)GNG10 [DGVbeta]
DECIPHERGNG10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGNG10 
Mutations
ICGC Data PortalGNG10 
TCGA Data PortalGNG10 
Broad Tumor PortalGNG10
OASIS PortalGNG10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGNG10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGNG10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GNG10
DgiDB (Drug Gene Interaction Database)GNG10
DoCM (Curated mutations)GNG10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GNG10 (select a term)
intoGenGNG10
Cancer3DGNG10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604389   
Orphanet
MedgenGNG10
Genetic Testing Registry GNG10
NextProtP50151 [Medical]
TSGene2790
GENETestsGNG10
Huge Navigator GNG10 [HugePedia]
snp3D : Map Gene to Disease2790
BioCentury BCIQGNG10
ClinGenGNG10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2790
Chemical/Pharm GKB GenePA28781
Clinical trialGNG10
Miscellaneous
canSAR (ICR)GNG10 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGNG10
EVEXGNG10
GoPubMedGNG10
iHOPGNG10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:17:31 CEST 2017

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