Atlas of Genetics and Cytogenetics in Oncology and Haematology

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GNG12 (guanine nucleotide binding protein (G protein), gamma 12)

Identity

Other names-
HGNC (Hugo) GNG12
LocusID (NCBI) 55970
Location 1p31.3
Location_base_pair Starts at 68167149 and ends at 68299155 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)GNG12   19663
Entrez_Gene (NCBI)GNG12  55970  guanine nucleotide binding protein (G protein), gamma 12
Cards
GeneCards (Weizmann)GNG12
Ensembl (Hinxton)ENSG00000172380 [Gene_View]  chr1:68167149-68299155 [Contig_View]  GNG12 [Vega]
AceView (NCBI)GNG12
Genatlas (Paris)GNG12
SOURCE (Stanford)NM_018841
Genomic and cartography
GoldenPath (UCSC)GNG12  -  1p31.3   chr1:68167149-68299155 -  1p31.3   [Description]    (hg19-Feb_2009)
EnsemblGNG12 - 1p31.3 [CytoView]
Mapping of homologs : NCBIGNG12 [Mapview]
Gene and transcription
Genbank (Entrez)AF119663 AF123766 AF365871 AF493879 AK055914
RefSeq transcript (SRS)NM_018841
RefSeq transcript (Entrez)NM_018841
RefSeq genomic (SRS)AC_000133 NC_000001 NC_018912 NT_032977 NW_001838579 NW_004077990
RefSeq genomic (Entrez)AC_000133 NC_000001 NC_018912 NT_032977 NW_001838579 NW_004077990
Consensus coding sequences : CCDS (NCBI)GNG12
Cluster EST : UnigeneHs.431101 [ SRS ] Hs.431101 [ NCBI ]
CGAP (NCI)Hs.431101
Alternative Splicing : Fast-db (Paris)GSHG0002169
Alternative Splicing GalleryENSG00000172380
Gene ExpressionGNG12 [ NCBI-GEO ]   GNG12 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UBI6 (SRS) Q9UBI6 (Uniprot)
NextProtQ9UBI6
With graphics : InterProQ9UBI6
Splice isoforms : SwissVarQ9UBI6(Swissvar)
Domaine pattern : Prosite (SRS)G_PROTEIN_GAMMA (PS50058)   
Domaine pattern : Prosite (Expaxy)G_PROTEIN_GAMMA (PS50058)   
Domains : Interpro (SRS)G-protein_gamma-like_dom    Gprotein-gamma   
Domains : Interpro (EBI)G-protein_gamma-like_dom    Gprotein-gamma   
Related proteins : CluSTrQ9UBI6
Domain families : Pfam (SRS)G-gamma (PF00631)   
Domain families : Pfam (Sanger)G-gamma (PF00631)   
Domain families : Pfam (NCBI)pfam00631   
Domain families : Smart (EMBL)GGL (SM00224)  
DMDM55970
Blocks (Seattle)Q9UBI6
Human Protein AtlasENSG00000172380
HPRD13592
IPIIPI00221232   
Protein Interaction databases
DIP (DOE-UCLA)Q9UBI6
IntAct (EBI)Q9UBI6
FunCoupENSG00000172380
REACTOMEGNG12
Protein Interaction Database55970
BioGRIDGNG12
InParanoidQ9UBI6
Interologous Interaction database Q9UBI6
IntegromeDBGNG12
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)GNG12
SNP (GeneSNP Utah)GNG12
SNP : HGBaseGNG12
Genetic variants : HAPMAPGNG12
Somatic Mutations in Cancer : COSMICGNG12 
CONAN: Copy Number AnalysisGNG12 
Mutations and Diseases : HGMDGNG12
OMIM
GENETests
Disease Genetic AssociationGNG12
Huge Navigator GNG12 [HugePedia]  GNG12 [HugeCancerGEM]
Genomic VariantsGNG12  GNG12 [DGVbeta]
snp3D : Map Gene to Disease55970
General knowledge
Homologs : HomoloGeneGNG12
Homology/Alignments : Family Browser (UCSC)GNG12
Phylogenetic Trees/Animal Genes : TreeFamGNG12
Chemical/Protein Interactions : CTD55970
Chemical/Pharm GKB GenePA134956700
Clinical trialGNG12
Cancer Resource (Charite)ENSG00000172380
Ontology : AmiGOsignal transducer activity  heterotrimeric G-protein complex  actin filament  plasma membrane  energy reserve metabolic process  signal transduction  G-protein coupled receptor signaling pathway  synaptic transmission  cerebral cortex development  response to lipopolysaccharide  phosphate ion binding  small molecule metabolic process  cellular response to glucagon stimulus  
Ontology : EGO-EBIsignal transducer activity  heterotrimeric G-protein complex  actin filament  plasma membrane  energy reserve metabolic process  signal transduction  G-protein coupled receptor signaling pathway  synaptic transmission  cerebral cortex development  response to lipopolysaccharide  phosphate ion binding  small molecule metabolic process  cellular response to glucagon stimulus  
Pathways : KEGGMAPK signaling pathwayRegulation of actin cytoskeleton
Other databases
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
PubGeneGNG12
iHOPGNG12
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:34:57 CEST 2013
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