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GNG13 (G protein subunit gamma 13)

Identity

Alias_namesclone:h2-35
Alias_symbol (synonym)h2-35
G(gamma)13
Other alias
HGNC (Hugo) GNG13
LocusID (NCBI) 51764
Atlas_Id 43292
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 798041 and ends at 800733 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GNG13   14131
Cards
Entrez_Gene (NCBI)GNG13  51764  G protein subunit gamma 13
AliasesG(gamma)13; h2-35
GeneCards (Weizmann)GNG13
Ensembl hg19 (Hinxton)ENSG00000127588 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000127588 [Gene_View]  chr16:798041-800733 [Contig_View]  GNG13 [Vega]
ICGC DataPortalENSG00000127588
TCGA cBioPortalGNG13
AceView (NCBI)GNG13
Genatlas (Paris)GNG13
WikiGenes51764
SOURCE (Princeton)GNG13
Genetics Home Reference (NIH)GNG13
Genomic and cartography
GoldenPath hg38 (UCSC)GNG13  -     chr16:798041-800733 -  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GNG13  -     16p13.3   [Description]    (hg19-Feb_2009)
EnsemblGNG13 - 16p13.3 [CytoView hg19]  GNG13 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBIGNG13 [Mapview hg19]  GNG13 [Mapview hg38]
OMIM607298   
Gene and transcription
Genbank (Entrez)AB030207 AF493880 AK312139 AY029486 BC093760
RefSeq transcript (Entrez)NM_016541
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GNG13
Cluster EST : UnigeneHs.247888 [ NCBI ]
CGAP (NCI)Hs.247888
Alternative Splicing GalleryENSG00000127588
Gene ExpressionGNG13 [ NCBI-GEO ]   GNG13 [ EBI - ARRAY_EXPRESS ]   GNG13 [ SEEK ]   GNG13 [ MEM ]
Gene Expression Viewer (FireBrowse)GNG13 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51764
GTEX Portal (Tissue expression)GNG13
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P2W3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P2W3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P2W3
Splice isoforms : SwissVarQ9P2W3
PhosPhoSitePlusQ9P2W3
Domaine pattern : Prosite (Expaxy)G_PROTEIN_GAMMA (PS50058)   
Domains : Interpro (EBI)G-protein_gamma-like_dom    Gprotein-gamma   
Domain families : Pfam (Sanger)G-gamma (PF00631)   
Domain families : Pfam (NCBI)pfam00631   
Domain families : Smart (EMBL)GGL (SM00224)  
Conserved Domain (NCBI)GNG13
DMDM Disease mutations51764
Blocks (Seattle)GNG13
SuperfamilyQ9P2W3
Human Protein AtlasENSG00000127588
Peptide AtlasQ9P2W3
HPRD12116
IPIIPI00009785   
Protein Interaction databases
DIP (DOE-UCLA)Q9P2W3
IntAct (EBI)Q9P2W3
FunCoupENSG00000127588
BioGRIDGNG13
STRING (EMBL)GNG13
ZODIACGNG13
Ontologies - Pathways
QuickGOQ9P2W3
Ontology : AmiGOsignal transducer activity  heterotrimeric G-protein complex  plasma membrane  phospholipase C-activating G-protein coupled receptor signaling pathway  dendrite  G-protein beta-subunit binding  sensory perception of taste  cellular response to glucagon stimulus  
Ontology : EGO-EBIsignal transducer activity  heterotrimeric G-protein complex  plasma membrane  phospholipase C-activating G-protein coupled receptor signaling pathway  dendrite  G-protein beta-subunit binding  sensory perception of taste  cellular response to glucagon stimulus  
Pathways : KEGG   
NDEx NetworkGNG13
Atlas of Cancer Signalling NetworkGNG13
Wikipedia pathwaysGNG13
Orthology - Evolution
OrthoDB51764
GeneTree (enSembl)ENSG00000127588
Phylogenetic Trees/Animal Genes : TreeFamGNG13
HOVERGENQ9P2W3
HOGENOMQ9P2W3
Homologs : HomoloGeneGNG13
Homology/Alignments : Family Browser (UCSC)GNG13
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGNG13 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GNG13
dbVarGNG13
ClinVarGNG13
1000_GenomesGNG13 
Exome Variant ServerGNG13
ExAC (Exome Aggregation Consortium)GNG13 (select the gene name)
Genetic variants : HAPMAP51764
Genomic Variants (DGV)GNG13 [DGVbeta]
DECIPHERGNG13 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGNG13 
Mutations
ICGC Data PortalGNG13 
TCGA Data PortalGNG13 
Broad Tumor PortalGNG13
OASIS PortalGNG13 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGNG13  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGNG13
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GNG13
DgiDB (Drug Gene Interaction Database)GNG13
DoCM (Curated mutations)GNG13 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GNG13 (select a term)
intoGenGNG13
Cancer3DGNG13(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607298   
Orphanet
MedgenGNG13
Genetic Testing Registry GNG13
NextProtQ9P2W3 [Medical]
TSGene51764
GENETestsGNG13
Target ValidationGNG13
Huge Navigator GNG13 [HugePedia]
snp3D : Map Gene to Disease51764
BioCentury BCIQGNG13
ClinGenGNG13
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51764
Chemical/Pharm GKB GenePA28783
Clinical trialGNG13
Miscellaneous
canSAR (ICR)GNG13 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGNG13
EVEXGNG13
GoPubMedGNG13
iHOPGNG13
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:10:08 CEST 2017

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