Atlas of Genetics and Cytogenetics in Oncology and Haematology


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GNG7 (G protein subunit gamma 7)

Identity

Alias_namesguanine nucleotide binding protein (G protein)
Alias_symbol (synonym)FLJ00058
Other alias-
HGNC (Hugo) GNG7
LocusID (NCBI) 2788
Atlas_Id 40732
Location 19p13.3  [Link to chromosome band 19p13]
Location_base_pair Starts at 2511220 and ends at 2702748 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GNG7 (19p13.3) / ARHGEF18 (19p13.2)GNG7 (19p13.3) / LINC00535 (8q22.1)GNG7 (19p13.3) / PLA2G2A (1p36.13)
GNG7 (19p13.3) / SCAMP4 (19p13.3)GNG7 (19p13.3) / SLC26A1 (4p16.3)GNG7 (19p13.3) / TACC3 (4p16.3)
LMNB2 (19p13.3) / GNG7 (19p13.3)MKNK2 (19p13.3) / GNG7 (19p13.3)NRN1 (6p25.1) / GNG7 (19p13.3)
GNG7 19p13.3 / ARHGEF18 19p13.2GNG7 19p13.3 / PLA2G2A 1p36.13GNG7 19p13.3 / TACC3 4p16.3
LMNB2 19p13.3 / GNG7 19p13.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GNG7   4410
Cards
Entrez_Gene (NCBI)GNG7  2788  G protein subunit gamma 7
Aliases
GeneCards (Weizmann)GNG7
Ensembl hg19 (Hinxton)ENSG00000176533 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176533 [Gene_View]  chr19:2511220-2702748 [Contig_View]  GNG7 [Vega]
ICGC DataPortalENSG00000176533
TCGA cBioPortalGNG7
AceView (NCBI)GNG7
Genatlas (Paris)GNG7
WikiGenes2788
SOURCE (Princeton)GNG7
Genetics Home Reference (NIH)GNG7
Genomic and cartography
GoldenPath hg38 (UCSC)GNG7  -     chr19:2511220-2702748 -  19p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GNG7  -     19p13.3   [Description]    (hg19-Feb_2009)
EnsemblGNG7 - 19p13.3 [CytoView hg19]  GNG7 - 19p13.3 [CytoView hg38]
Mapping of homologs : NCBIGNG7 [Mapview hg19]  GNG7 [Mapview hg38]
OMIM604430   
Gene and transcription
Genbank (Entrez)AB010414 AF493874 AK024465 AK123863 AK311750
RefSeq transcript (Entrez)NM_052847
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GNG7
Cluster EST : UnigeneHs.735237 [ NCBI ]
CGAP (NCI)Hs.735237
Alternative Splicing GalleryENSG00000176533
Gene ExpressionGNG7 [ NCBI-GEO ]   GNG7 [ EBI - ARRAY_EXPRESS ]   GNG7 [ SEEK ]   GNG7 [ MEM ]
Gene Expression Viewer (FireBrowse)GNG7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2788
GTEX Portal (Tissue expression)GNG7
Protein : pattern, domain, 3D structure
UniProt/SwissProtO60262   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO60262  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO60262
Splice isoforms : SwissVarO60262
PhosPhoSitePlusO60262
Domaine pattern : Prosite (Expaxy)G_PROTEIN_GAMMA (PS50058)   
Domains : Interpro (EBI)G-protein_gamma-like_dom    Gprotein-gamma   
Domain families : Pfam (Sanger)G-gamma (PF00631)   
Domain families : Pfam (NCBI)pfam00631   
Domain families : Smart (EMBL)GGL (SM00224)  
Conserved Domain (NCBI)GNG7
DMDM Disease mutations2788
Blocks (Seattle)GNG7
SuperfamilyO60262
Human Protein AtlasENSG00000176533
Peptide AtlasO60262
HPRD07638
IPIIPI00028509   
Protein Interaction databases
DIP (DOE-UCLA)O60262
IntAct (EBI)O60262
FunCoupENSG00000176533
BioGRIDGNG7
STRING (EMBL)GNG7
ZODIACGNG7
Ontologies - Pathways
QuickGOO60262
Ontology : AmiGOsignal transducer activity  heterotrimeric G-protein complex  plasma membrane  G-protein coupled receptor signaling pathway  regulation of G-protein coupled receptor protein signaling pathway  extracellular exosome  cellular response to glucagon stimulus  
Ontology : EGO-EBIsignal transducer activity  heterotrimeric G-protein complex  plasma membrane  G-protein coupled receptor signaling pathway  regulation of G-protein coupled receptor protein signaling pathway  extracellular exosome  cellular response to glucagon stimulus  
Pathways : KEGG   
NDEx NetworkGNG7
Atlas of Cancer Signalling NetworkGNG7
Wikipedia pathwaysGNG7
Orthology - Evolution
OrthoDB2788
GeneTree (enSembl)ENSG00000176533
Phylogenetic Trees/Animal Genes : TreeFamGNG7
HOVERGENO60262
HOGENOMO60262
Homologs : HomoloGeneGNG7
Homology/Alignments : Family Browser (UCSC)GNG7
Gene fusions - Rearrangements
Fusion : MitelmanGNG7/ARHGEF18 [19p13.3/19p13.2]  
Fusion : MitelmanGNG7/PLA2G2A [19p13.3/1p36.13]  [t(1;19)(p36;p13)]  
Fusion : MitelmanGNG7/SCAMP4 [19p13.3/19p13.3]  [inv(19)(p13p13)]  
Fusion : MitelmanGNG7/TACC3 [19p13.3/4p16.3]  [t(4;19)(p16;p13)]  
Fusion : MitelmanLMNB2/GNG7 [19p13.3/19p13.3]  [t(19;19)(p13;p13)]  
Fusion : MitelmanNRN1/GNG7 [6p25.1/19p13.3]  [t(6;19)(p25;p13)]  
Fusion: TCGAGNG7 19p13.3 ARHGEF18 19p13.2 BRCA
Fusion: TCGAGNG7 19p13.3 PLA2G2A 1p36.13 SKCM
Fusion: TCGAGNG7 19p13.3 TACC3 4p16.3 LGG
Fusion: TCGALMNB2 19p13.3 GNG7 19p13.3 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGNG7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GNG7
dbVarGNG7
ClinVarGNG7
1000_GenomesGNG7 
Exome Variant ServerGNG7
ExAC (Exome Aggregation Consortium)GNG7 (select the gene name)
Genetic variants : HAPMAP2788
Genomic Variants (DGV)GNG7 [DGVbeta]
DECIPHERGNG7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGNG7 
Mutations
ICGC Data PortalGNG7 
TCGA Data PortalGNG7 
Broad Tumor PortalGNG7
OASIS PortalGNG7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGNG7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGNG7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GNG7
DgiDB (Drug Gene Interaction Database)GNG7
DoCM (Curated mutations)GNG7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GNG7 (select a term)
intoGenGNG7
Cancer3DGNG7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604430   
Orphanet
MedgenGNG7
Genetic Testing Registry GNG7
NextProtO60262 [Medical]
TSGene2788
GENETestsGNG7
Target ValidationGNG7
Huge Navigator GNG7 [HugePedia]
snp3D : Map Gene to Disease2788
BioCentury BCIQGNG7
ClinGenGNG7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2788
Chemical/Pharm GKB GenePA28789
Clinical trialGNG7
Miscellaneous
canSAR (ICR)GNG7 (select the gene name)
Probes
Litterature
PubMed27 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGNG7
EVEXGNG7
GoPubMedGNG7
iHOPGNG7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:35:34 CEST 2017

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