Atlas of Genetics and Cytogenetics in Oncology and Haematology


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GNRHR (gonadotropin releasing hormone receptor)

Identity

Alias_namesGRHR
gonadotropin-releasing hormone receptor
Alias_symbol (synonym)LHRHR
Other aliasGNRHR1
HH7
LRHR
HGNC (Hugo) GNRHR
LocusID (NCBI) 2798
Atlas_Id 45941
Location 4q13.2  [Link to chromosome band 4q13]
Location_base_pair Starts at 67737381 and ends at 67756086 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GNRHR   4421
Cards
Entrez_Gene (NCBI)GNRHR  2798  gonadotropin releasing hormone receptor
AliasesGNRHR1; GRHR; HH7; LHRHR; 
LRHR
GeneCards (Weizmann)GNRHR
Ensembl hg19 (Hinxton)ENSG00000109163 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000109163 [Gene_View]  chr4:67737381-67756086 [Contig_View]  GNRHR [Vega]
ICGC DataPortalENSG00000109163
TCGA cBioPortalGNRHR
AceView (NCBI)GNRHR
Genatlas (Paris)GNRHR
WikiGenes2798
SOURCE (Princeton)GNRHR
Genetics Home Reference (NIH)GNRHR
Genomic and cartography
GoldenPath hg38 (UCSC)GNRHR  -     chr4:67737381-67756086 -  4q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GNRHR  -     4q13.2   [Description]    (hg19-Feb_2009)
EnsemblGNRHR - 4q13.2 [CytoView hg19]  GNRHR - 4q13.2 [CytoView hg38]
Mapping of homologs : NCBIGNRHR [Mapview hg19]  GNRHR [Mapview hg38]
OMIM138850   146110   
Gene and transcription
Genbank (Entrez)AY392011 BC113546 HQ258385 L03380 L07949
RefSeq transcript (Entrez)NM_000406 NM_001012763
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GNRHR
Cluster EST : UnigeneHs.407587 [ NCBI ]
CGAP (NCI)Hs.407587
Alternative Splicing GalleryENSG00000109163
Gene ExpressionGNRHR [ NCBI-GEO ]   GNRHR [ EBI - ARRAY_EXPRESS ]   GNRHR [ SEEK ]   GNRHR [ MEM ]
Gene Expression Viewer (FireBrowse)GNRHR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2798
GTEX Portal (Tissue expression)GNRHR
Protein : pattern, domain, 3D structure
UniProt/SwissProtP30968   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP30968  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP30968
Splice isoforms : SwissVarP30968
PhosPhoSitePlusP30968
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    GphnRH_fam_rcpt    GphnRH_rcpt   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)GNRHR
DMDM Disease mutations2798
Blocks (Seattle)GNRHR
SuperfamilyP30968
Human Protein AtlasENSG00000109163
Peptide AtlasP30968
HPRD00732
IPIIPI00028132   IPI00219387   
Protein Interaction databases
DIP (DOE-UCLA)P30968
IntAct (EBI)P30968
FunCoupENSG00000109163
BioGRIDGNRHR
STRING (EMBL)GNRHR
ZODIACGNRHR
Ontologies - Pathways
QuickGOP30968
Ontology : AmiGOgonadotropin-releasing hormone receptor activity  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  multicellular organism development  membrane  peptide binding  cellular response to gonadotropin-releasing hormone  
Ontology : EGO-EBIgonadotropin-releasing hormone receptor activity  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  multicellular organism development  membrane  peptide binding  cellular response to gonadotropin-releasing hormone  
Pathways : KEGGNeuroactive ligand-receptor interaction    GnRH signaling pathway   
NDEx NetworkGNRHR
Atlas of Cancer Signalling NetworkGNRHR
Wikipedia pathwaysGNRHR
Orthology - Evolution
OrthoDB2798
GeneTree (enSembl)ENSG00000109163
Phylogenetic Trees/Animal Genes : TreeFamGNRHR
HOVERGENP30968
HOGENOMP30968
Homologs : HomoloGeneGNRHR
Homology/Alignments : Family Browser (UCSC)GNRHR
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGNRHR [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GNRHR
dbVarGNRHR
ClinVarGNRHR
1000_GenomesGNRHR 
Exome Variant ServerGNRHR
ExAC (Exome Aggregation Consortium)GNRHR (select the gene name)
Genetic variants : HAPMAP2798
Genomic Variants (DGV)GNRHR [DGVbeta]
DECIPHERGNRHR [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGNRHR 
Mutations
ICGC Data PortalGNRHR 
TCGA Data PortalGNRHR 
Broad Tumor PortalGNRHR
OASIS PortalGNRHR [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGNRHR  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGNRHR
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GNRHR
DgiDB (Drug Gene Interaction Database)GNRHR
DoCM (Curated mutations)GNRHR (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GNRHR (select a term)
intoGenGNRHR
Cancer3DGNRHR(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM138850    146110   
Orphanet8668   
MedgenGNRHR
Genetic Testing Registry GNRHR
NextProtP30968 [Medical]
TSGene2798
GENETestsGNRHR
Target ValidationGNRHR
Huge Navigator GNRHR [HugePedia]
snp3D : Map Gene to Disease2798
BioCentury BCIQGNRHR
ClinGenGNRHR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2798
Chemical/Pharm GKB GenePA28800
Clinical trialGNRHR
Miscellaneous
canSAR (ICR)GNRHR (select the gene name)
Probes
Litterature
PubMed128 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGNRHR
EVEXGNRHR
GoPubMedGNRHR
iHOPGNRHR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:35:38 CEST 2017

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