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GOLGA6L1 (golgin A6 family-like 1)

Identity

Alias_namesgolgi autoantigen, golgin subfamily a, 6-like 1
Other alias-
HGNC (Hugo) GOLGA6L1
LocusID (NCBI) 283767
Atlas_Id 63877
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 23127066 and ends at 23136822 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GOLGA6L1   37444
Cards
Entrez_Gene (NCBI)GOLGA6L1  283767  golgin A6 family-like 1
Aliases
GeneCards (Weizmann)GOLGA6L1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:23127066-23136822 [Contig_View]  GOLGA6L1 [Vega]
TCGA cBioPortalGOLGA6L1
AceView (NCBI)GOLGA6L1
Genatlas (Paris)GOLGA6L1
WikiGenes283767
SOURCE (Princeton)GOLGA6L1
Genetics Home Reference (NIH)GOLGA6L1
Genomic and cartography
GoldenPath hg38 (UCSC)GOLGA6L1  -     chr15:23127066-23136822 -  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GOLGA6L1  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblGOLGA6L1 - 15q11.2 [CytoView hg19]  GOLGA6L1 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBIGOLGA6L1 [Mapview hg19]  GOLGA6L1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097517 BC127816
RefSeq transcript (Entrez)NM_001001413
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_187603 NT_187659
Consensus coding sequences : CCDS (NCBI)GOLGA6L1
Cluster EST : UnigeneHs.531569 [ NCBI ]
CGAP (NCI)Hs.531569
Gene ExpressionGOLGA6L1 [ NCBI-GEO ]   GOLGA6L1 [ EBI - ARRAY_EXPRESS ]   GOLGA6L1 [ SEEK ]   GOLGA6L1 [ MEM ]
Gene Expression Viewer (FireBrowse)GOLGA6L1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283767
GTEX Portal (Tissue expression)GOLGA6L1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N7Z2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N7Z2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N7Z2
Splice isoforms : SwissVarQ8N7Z2
PhosPhoSitePlusQ8N7Z2
Domains : Interpro (EBI)GOLGA6L   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GOLGA6L1
DMDM Disease mutations283767
Blocks (Seattle)GOLGA6L1
SuperfamilyQ8N7Z2
Peptide AtlasQ8N7Z2
IPIIPI01010338   IPI00887675   IPI00888550   
Protein Interaction databases
DIP (DOE-UCLA)Q8N7Z2
IntAct (EBI)Q8N7Z2
BioGRIDGOLGA6L1
STRING (EMBL)GOLGA6L1
ZODIACGOLGA6L1
Ontologies - Pathways
QuickGOQ8N7Z2
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkGOLGA6L1
Atlas of Cancer Signalling NetworkGOLGA6L1
Wikipedia pathwaysGOLGA6L1
Orthology - Evolution
OrthoDB283767
Phylogenetic Trees/Animal Genes : TreeFamGOLGA6L1
HOVERGENQ8N7Z2
HOGENOMQ8N7Z2
Homologs : HomoloGeneGOLGA6L1
Homology/Alignments : Family Browser (UCSC)GOLGA6L1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGOLGA6L1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GOLGA6L1
dbVarGOLGA6L1
ClinVarGOLGA6L1
1000_GenomesGOLGA6L1 
Exome Variant ServerGOLGA6L1
ExAC (Exome Aggregation Consortium)GOLGA6L1 (select the gene name)
Genetic variants : HAPMAP283767
Genomic Variants (DGV)GOLGA6L1 [DGVbeta]
DECIPHERGOLGA6L1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGOLGA6L1 
Mutations
ICGC Data PortalGOLGA6L1 
TCGA Data PortalGOLGA6L1 
Broad Tumor PortalGOLGA6L1
OASIS PortalGOLGA6L1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGOLGA6L1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGOLGA6L1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GOLGA6L1
DgiDB (Drug Gene Interaction Database)GOLGA6L1
DoCM (Curated mutations)GOLGA6L1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GOLGA6L1 (select a term)
intoGenGOLGA6L1
Cancer3DGOLGA6L1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGOLGA6L1
Genetic Testing Registry GOLGA6L1
NextProtQ8N7Z2 [Medical]
TSGene283767
GENETestsGOLGA6L1
Huge Navigator GOLGA6L1 [HugePedia]
snp3D : Map Gene to Disease283767
BioCentury BCIQGOLGA6L1
ClinGenGOLGA6L1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283767
Chemical/Pharm GKB GenePA165478683
Clinical trialGOLGA6L1
Miscellaneous
canSAR (ICR)GOLGA6L1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGOLGA6L1
EVEXGOLGA6L1
GoPubMedGOLGA6L1
iHOPGOLGA6L1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:14:02 CEST 2017

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