Atlas of Genetics and Cytogenetics in Oncology and Haematology


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GOLGA6L17P (golgin A6 family like 17, pseudogene)

Identity

Alias (NCBI)GOLGA6L21P
HGNC (Hugo) GOLGA6L17P
HGNC Previous nameGOLGA6L21P
HGNC Previous namegolgin A6 family-like 21, pseudogene
LocusID (NCBI) 642402
Atlas_Id 63879
Location 15q25.2  [Link to chromosome band 15q25]
Location_base_pair Starts at 82519590 and ends at 82526484 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GOLGA6L17P   49414
Cards
Entrez_Gene (NCBI)GOLGA6L17P  642402  golgin A6 family like 17, pseudogene
AliasesGOLGA6L21P
GeneCards (Weizmann)GOLGA6L17P
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr15:82519590-82526484 [Contig_View]  GOLGA6L17P [Vega]
TCGA cBioPortalGOLGA6L17P
AceView (NCBI)GOLGA6L17P
Genatlas (Paris)GOLGA6L17P
WikiGenes642402
SOURCE (Princeton)GOLGA6L17P
Genetics Home Reference (NIH)GOLGA6L17P
Genomic and cartography
GoldenPath hg38 (UCSC)GOLGA6L17P  -     chr15:82519590-82526484 +  15q25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GOLGA6L17P  -     15q25.2   [Description]    (hg19-Feb_2009)
GoldenPathGOLGA6L17P - 15q25.2 [CytoView hg19]  GOLGA6L17P - 15q25.2 [CytoView hg38]
genome Data Viewer NCBIGOLGA6L17P [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK301885
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GOLGA6L17P
Gene ExpressionGOLGA6L17P [ NCBI-GEO ]   GOLGA6L17P [ EBI - ARRAY_EXPRESS ]   GOLGA6L17P [ SEEK ]   GOLGA6L17P [ MEM ]
Gene Expression Viewer (FireBrowse)GOLGA6L17P [ Firebrowse - Broad ]
GenevisibleExpression of GOLGA6L17P in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)642402
GTEX Portal (Tissue expression)GOLGA6L17P
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GOLGA6L17P
DMDM Disease mutations642402
Blocks (Seattle)GOLGA6L17P
Protein Interaction databases
BioGRIDGOLGA6L17P
STRING (EMBL)GOLGA6L17P
ZODIACGOLGA6L17P
Ontologies - Pathways
Huge Navigator GOLGA6L17P [HugePedia]
snp3D : Map Gene to Disease642402
BioCentury BCIQGOLGA6L17P
ClinGenGOLGA6L17P
Clinical trials, drugs, therapy
Protein Interactions : CTD642402
Clinical trialGOLGA6L17P
Miscellaneous
canSAR (ICR)GOLGA6L17P (select the gene name)
HarmonizomeGOLGA6L17P
DataMed IndexGOLGA6L17P
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineGOLGA6L17P
EVEXGOLGA6L17P
GoPubMedGOLGA6L17P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jul 16 15:57:10 CEST 2020

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