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GOLGA6L6 (golgin A6 family-like 6)

Identity

Alias_namesgolgi autoantigen, golgin subfamily a, 6-like 6
Alias_symbol (synonym)FLJ36131
Other alias-
HGNC (Hugo) GOLGA6L6
LocusID (NCBI) 727832
Atlas_Id 63885
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 20531856 and ends at 20541800 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GOLGA6L6   37225
Cards
Entrez_Gene (NCBI)GOLGA6L6  727832  golgin A6 family-like 6
Aliases
GeneCards (Weizmann)GOLGA6L6
Ensembl hg19 (Hinxton)ENSG00000277322 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000277322 [Gene_View]  chr15:20531856-20541800 [Contig_View]  GOLGA6L6 [Vega]
ICGC DataPortalENSG00000277322
TCGA cBioPortalGOLGA6L6
AceView (NCBI)GOLGA6L6
Genatlas (Paris)GOLGA6L6
WikiGenes727832
SOURCE (Princeton)GOLGA6L6
Genetics Home Reference (NIH)GOLGA6L6
Genomic and cartography
GoldenPath hg38 (UCSC)GOLGA6L6  -     chr15:20531856-20541800 -  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GOLGA6L6  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblGOLGA6L6 - 15q11.2 [CytoView hg19]  GOLGA6L6 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBIGOLGA6L6 [Mapview hg19]  GOLGA6L6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093450
RefSeq transcript (Entrez)NM_001145004
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GOLGA6L6
Cluster EST : UnigeneHs.569472 [ NCBI ]
CGAP (NCI)Hs.569472
Alternative Splicing GalleryENSG00000277322
Gene ExpressionGOLGA6L6 [ NCBI-GEO ]   GOLGA6L6 [ EBI - ARRAY_EXPRESS ]   GOLGA6L6 [ SEEK ]   GOLGA6L6 [ MEM ]
Gene Expression Viewer (FireBrowse)GOLGA6L6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)727832
GTEX Portal (Tissue expression)GOLGA6L6
Protein : pattern, domain, 3D structure
UniProt/SwissProtA8MZA4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA8MZA4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA8MZA4
Splice isoforms : SwissVarA8MZA4
PhosPhoSitePlusA8MZA4
Domains : Interpro (EBI)GOLGA6L   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)GOLGA6L6
DMDM Disease mutations727832
Blocks (Seattle)GOLGA6L6
SuperfamilyA8MZA4
Human Protein AtlasENSG00000277322
Peptide AtlasA8MZA4
IPIIPI00167832   
Protein Interaction databases
DIP (DOE-UCLA)A8MZA4
IntAct (EBI)A8MZA4
FunCoupENSG00000277322
BioGRIDGOLGA6L6
STRING (EMBL)GOLGA6L6
ZODIACGOLGA6L6
Ontologies - Pathways
QuickGOA8MZA4
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkGOLGA6L6
Atlas of Cancer Signalling NetworkGOLGA6L6
Wikipedia pathwaysGOLGA6L6
Orthology - Evolution
OrthoDB727832
GeneTree (enSembl)ENSG00000277322
Phylogenetic Trees/Animal Genes : TreeFamGOLGA6L6
HOVERGENA8MZA4
HOGENOMA8MZA4
Homologs : HomoloGeneGOLGA6L6
Homology/Alignments : Family Browser (UCSC)GOLGA6L6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGOLGA6L6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GOLGA6L6
dbVarGOLGA6L6
ClinVarGOLGA6L6
1000_GenomesGOLGA6L6 
Exome Variant ServerGOLGA6L6
ExAC (Exome Aggregation Consortium)GOLGA6L6 (select the gene name)
Genetic variants : HAPMAP727832
Genomic Variants (DGV)GOLGA6L6 [DGVbeta]
DECIPHERGOLGA6L6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGOLGA6L6 
Mutations
ICGC Data PortalGOLGA6L6 
TCGA Data PortalGOLGA6L6 
Broad Tumor PortalGOLGA6L6
OASIS PortalGOLGA6L6 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDGOLGA6L6
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GOLGA6L6
DgiDB (Drug Gene Interaction Database)GOLGA6L6
DoCM (Curated mutations)GOLGA6L6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GOLGA6L6 (select a term)
intoGenGOLGA6L6
Cancer3DGOLGA6L6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenGOLGA6L6
Genetic Testing Registry GOLGA6L6
NextProtA8MZA4 [Medical]
TSGene727832
GENETestsGOLGA6L6
Target ValidationGOLGA6L6
Huge Navigator GOLGA6L6 [HugePedia]
snp3D : Map Gene to Disease727832
BioCentury BCIQGOLGA6L6
ClinGenGOLGA6L6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD727832
Chemical/Pharm GKB GenePA165478846
Clinical trialGOLGA6L6
Miscellaneous
canSAR (ICR)GOLGA6L6 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGOLGA6L6
EVEXGOLGA6L6
GoPubMedGOLGA6L6
iHOPGOLGA6L6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:50:57 CEST 2017

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