Atlas of Genetics and Cytogenetics in Oncology and Haematology


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GOLGA7B (golgin A7 family member B)

Identity

Alias_namesC10orf133
C10orf132
chromosome 10 open reading frame 133
chromosome 10 open reading frame 132
golgi autoantigen, golgin subfamily a, 7B
golgin A7 family, member B
Alias_symbol (synonym)bA459F3.4
bA451M19.3
Other alias
HGNC (Hugo) GOLGA7B
LocusID (NCBI) 401647
Atlas_Id 63889
Location 10q24.2  [Link to chromosome band 10q24]
Location_base_pair Starts at 97850238 and ends at 97871578 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)GOLGA7B   31668
Cards
Entrez_Gene (NCBI)GOLGA7B  401647  golgin A7 family member B
AliasesC10orf132; C10orf133; bA451M19.3; bA459F3.4
GeneCards (Weizmann)GOLGA7B
Ensembl hg19 (Hinxton)ENSG00000155265 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000155265 [Gene_View]  chr10:97850238-97871578 [Contig_View]  GOLGA7B [Vega]
ICGC DataPortalENSG00000155265
TCGA cBioPortalGOLGA7B
AceView (NCBI)GOLGA7B
Genatlas (Paris)GOLGA7B
WikiGenes401647
SOURCE (Princeton)GOLGA7B
Genetics Home Reference (NIH)GOLGA7B
Genomic and cartography
GoldenPath hg38 (UCSC)GOLGA7B  -     chr10:97850238-97871578 +  10q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GOLGA7B  -     10q24.2   [Description]    (hg19-Feb_2009)
EnsemblGOLGA7B - 10q24.2 [CytoView hg19]  GOLGA7B - 10q24.2 [CytoView hg38]
Mapping of homologs : NCBIGOLGA7B [Mapview hg19]  GOLGA7B [Mapview hg38]
OMIM614189   
Gene and transcription
Genbank (Entrez)AK125454 AW172573 BC008047 BC020255 BC110810
RefSeq transcript (Entrez)NM_001010917
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)GOLGA7B
Cluster EST : UnigeneHs.567524 [ NCBI ]
CGAP (NCI)Hs.567524
Alternative Splicing GalleryENSG00000155265
Gene ExpressionGOLGA7B [ NCBI-GEO ]   GOLGA7B [ EBI - ARRAY_EXPRESS ]   GOLGA7B [ SEEK ]   GOLGA7B [ MEM ]
Gene Expression Viewer (FireBrowse)GOLGA7B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)401647
GTEX Portal (Tissue expression)GOLGA7B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2TAP0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2TAP0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2TAP0
Splice isoforms : SwissVarQ2TAP0
PhosPhoSitePlusQ2TAP0
Domains : Interpro (EBI)Golgin_A_7/ERF4   
Domain families : Pfam (Sanger)Erf4 (PF10256)   
Domain families : Pfam (NCBI)pfam10256   
Conserved Domain (NCBI)GOLGA7B
DMDM Disease mutations401647
Blocks (Seattle)GOLGA7B
SuperfamilyQ2TAP0
Human Protein AtlasENSG00000155265
Peptide AtlasQ2TAP0
HPRD16579
IPIIPI00402107   
Protein Interaction databases
DIP (DOE-UCLA)Q2TAP0
IntAct (EBI)Q2TAP0
FunCoupENSG00000155265
BioGRIDGOLGA7B
STRING (EMBL)GOLGA7B
ZODIACGOLGA7B
Ontologies - Pathways
QuickGOQ2TAP0
Ontology : AmiGOGolgi membrane  palmitoyltransferase complex  protein targeting to membrane  peptidyl-L-cysteine S-palmitoylation  protein-cysteine S-palmitoyltransferase activity  protein localization to plasma membrane  
Ontology : EGO-EBIGolgi membrane  palmitoyltransferase complex  protein targeting to membrane  peptidyl-L-cysteine S-palmitoylation  protein-cysteine S-palmitoyltransferase activity  protein localization to plasma membrane  
NDEx NetworkGOLGA7B
Atlas of Cancer Signalling NetworkGOLGA7B
Wikipedia pathwaysGOLGA7B
Orthology - Evolution
OrthoDB401647
GeneTree (enSembl)ENSG00000155265
Phylogenetic Trees/Animal Genes : TreeFamGOLGA7B
HOVERGENQ2TAP0
HOGENOMQ2TAP0
Homologs : HomoloGeneGOLGA7B
Homology/Alignments : Family Browser (UCSC)GOLGA7B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGOLGA7B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GOLGA7B
dbVarGOLGA7B
ClinVarGOLGA7B
1000_GenomesGOLGA7B 
Exome Variant ServerGOLGA7B
ExAC (Exome Aggregation Consortium)GOLGA7B (select the gene name)
Genetic variants : HAPMAP401647
Genomic Variants (DGV)GOLGA7B [DGVbeta]
DECIPHERGOLGA7B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGOLGA7B 
Mutations
ICGC Data PortalGOLGA7B 
TCGA Data PortalGOLGA7B 
Broad Tumor PortalGOLGA7B
OASIS PortalGOLGA7B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGOLGA7B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDGOLGA7B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch GOLGA7B
DgiDB (Drug Gene Interaction Database)GOLGA7B
DoCM (Curated mutations)GOLGA7B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)GOLGA7B (select a term)
intoGenGOLGA7B
Cancer3DGOLGA7B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614189   
Orphanet
MedgenGOLGA7B
Genetic Testing Registry GOLGA7B
NextProtQ2TAP0 [Medical]
TSGene401647
GENETestsGOLGA7B
Target ValidationGOLGA7B
Huge Navigator GOLGA7B [HugePedia]
snp3D : Map Gene to Disease401647
BioCentury BCIQGOLGA7B
ClinGenGOLGA7B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401647
Chemical/Pharm GKB GenePA164720284
Clinical trialGOLGA7B
Miscellaneous
canSAR (ICR)GOLGA7B (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineGOLGA7B
EVEXGOLGA7B
GoPubMedGOLGA7B
iHOPGOLGA7B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:50:58 CEST 2017

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