Atlas of Genetics and Cytogenetics in Oncology and Haematology


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GOLGA7B (golgin A7 family member B)

Identity

Alias (NCBI)C10orf132
C10orf133
bA451M19.3
bA459F3.4
HGNC (Hugo) GOLGA7B
HGNC Alias symbbA459F3.4
bA451M19.3
HGNC Previous nameC10orf133
 C10orf132
HGNC Previous namechromosome 10 open reading frame 133
 chromosome 10 open reading frame 132
 golgi autoantigen, golgin subfamily a, 7B
 golgin A7 family, member B
LocusID (NCBI) 401647
Atlas_Id 63889
Location 10q24.2  [Link to chromosome band 10q24]
Location_base_pair Starts at 97849843 and ends at 97871578 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)GOLGA7B   31668
Cards
Entrez_Gene (NCBI)GOLGA7B    golgin A7 family member B
AliasesC10orf132; C10orf133; bA451M19.3; bA459F3.4
GeneCards (Weizmann)GOLGA7B
Ensembl hg19 (Hinxton)ENSG00000155265 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000155265 [Gene_View]  ENSG00000155265 [Sequence]  chr10:97849843-97871578 [Contig_View]  GOLGA7B [Vega]
ICGC DataPortalENSG00000155265
TCGA cBioPortalGOLGA7B
AceView (NCBI)GOLGA7B
Genatlas (Paris)GOLGA7B
SOURCE (Princeton)GOLGA7B
Genetics Home Reference (NIH)GOLGA7B
Genomic and cartography
GoldenPath hg38 (UCSC)GOLGA7B  -     chr10:97849843-97871578 +  10q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)GOLGA7B  -     10q24.2   [Description]    (hg19-Feb_2009)
GoldenPathGOLGA7B - 10q24.2 [CytoView hg19]  GOLGA7B - 10q24.2 [CytoView hg38]
ImmunoBaseENSG00000155265
Genome Data Viewer NCBIGOLGA7B [Mapview hg19]  
OMIM614189   
Gene and transcription
Genbank (Entrez)AK125454 AW172573 BC008047 BC020255 BC110810
RefSeq transcript (Entrez)NM_001010917
Consensus coding sequences : CCDS (NCBI)GOLGA7B
Gene ExpressionGOLGA7B [ NCBI-GEO ]   GOLGA7B [ EBI - ARRAY_EXPRESS ]   GOLGA7B [ SEEK ]   GOLGA7B [ MEM ]
Gene Expression Viewer (FireBrowse)GOLGA7B [ Firebrowse - Broad ]
GenevisibleExpression of GOLGA7B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)401647
GTEX Portal (Tissue expression)GOLGA7B
Human Protein AtlasENSG00000155265-GOLGA7B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2TAP0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2TAP0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2TAP0
PhosPhoSitePlusQ2TAP0
Domains : Interpro (EBI)Golgin_A_7/ERF4   
Domain families : Pfam (Sanger)Erf4 (PF10256)   
Domain families : Pfam (NCBI)pfam10256   
Conserved Domain (NCBI)GOLGA7B
SuperfamilyQ2TAP0
AlphaFold pdb e-kbQ2TAP0   
Human Protein Atlas [tissue]ENSG00000155265-GOLGA7B [tissue]
HPRD16579
Protein Interaction databases
DIP (DOE-UCLA)Q2TAP0
IntAct (EBI)Q2TAP0
BioGRIDGOLGA7B
STRING (EMBL)GOLGA7B
ZODIACGOLGA7B
Ontologies - Pathways
QuickGOQ2TAP0
Ontology : AmiGOGolgi membrane  palmitoyltransferase complex  protein binding  protein targeting to membrane  peptidyl-L-cysteine S-palmitoylation  protein-cysteine S-palmitoyltransferase activity  enzyme binding  
Ontology : EGO-EBIGolgi membrane  palmitoyltransferase complex  protein binding  protein targeting to membrane  peptidyl-L-cysteine S-palmitoylation  protein-cysteine S-palmitoyltransferase activity  enzyme binding  
NDEx NetworkGOLGA7B
Atlas of Cancer Signalling NetworkGOLGA7B
Wikipedia pathwaysGOLGA7B
Orthology - Evolution
OrthoDB401647
GeneTree (enSembl)ENSG00000155265
Phylogenetic Trees/Animal Genes : TreeFamGOLGA7B
Homologs : HomoloGeneGOLGA7B
Homology/Alignments : Family Browser (UCSC)GOLGA7B
Gene fusions - Rearrangements
Fusion : QuiverGOLGA7B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerGOLGA7B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)GOLGA7B
dbVarGOLGA7B
ClinVarGOLGA7B
MonarchGOLGA7B
1000_GenomesGOLGA7B 
Exome Variant ServerGOLGA7B
GNOMAD BrowserENSG00000155265
Varsome BrowserGOLGA7B
ACMGGOLGA7B variants
VarityQ2TAP0
Genomic Variants (DGV)GOLGA7B [DGVbeta]
DECIPHERGOLGA7B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisGOLGA7B 
Mutations
ICGC Data PortalGOLGA7B 
TCGA Data PortalGOLGA7B 
Broad Tumor PortalGOLGA7B
OASIS PortalGOLGA7B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICGOLGA7B  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DGOLGA7B
Mutations and Diseases : HGMDGOLGA7B
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaGOLGA7B
DgiDB (Drug Gene Interaction Database)GOLGA7B
DoCM (Curated mutations)GOLGA7B
CIViC (Clinical Interpretations of Variants in Cancer)GOLGA7B
Cancer3DGOLGA7B
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614189   
Orphanet
DisGeNETGOLGA7B
MedgenGOLGA7B
Genetic Testing Registry GOLGA7B
NextProtQ2TAP0 [Medical]
GENETestsGOLGA7B
Target ValidationGOLGA7B
Huge Navigator GOLGA7B [HugePedia]
ClinGenGOLGA7B
Clinical trials, drugs, therapy
MyCancerGenomeGOLGA7B
Protein Interactions : CTDGOLGA7B
Pharm GKB GenePA164720284
PharosQ2TAP0
Clinical trialGOLGA7B
Miscellaneous
canSAR (ICR)GOLGA7B
HarmonizomeGOLGA7B
DataMed IndexGOLGA7B
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXGOLGA7B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:51:44 CEST 2021

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